Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1684 ATGGAATCTTGTGCGCAATTCGGGTTGTGGGTGGTCTTGATCTTGTGCTTGGCGTTTCAAATTCAACCCAATTATGGGTTCTACCTTCCGGGCAGTTACCCCCACAACTATGATGTCACGGATGAGTTGTGGGTGAAGGTGAATTCCCTCACTTCCATTGACACAGAAATGCCCTTTAGCTATTACAGCCTGCCCTTTTGCAAGCCCGAGGGTGGCATCAAGGACAGTGCCGAGAACCTTGGGGAGCTTCTCATGGGAGATAGGATAGAGAACTCTCCTTATAGGTTTAGGATGTACACCAATGAGTCTGAGATTTACTTGTGCCAGATCCAGGCGCTGTCCGGGGACCAGTTCAAGATCTTGAAGGAGAGGATTGATGAGATGTATCAGGTTAATTTGATTCTTGATAATTTGCCTGCTATTAGGTTCACACAGAAAGATGGGTACTTTATGAGATGGACCGGGTACCCTGTTGGTATTAAGATTGAGGATGCTTATTATGTGTTTAACCATCTCAAGTTCAATGTTCTTGTCCACAAGTACGAGGAGACCAATGTGGCTCGCGTAATGGGGACTGTAGAGGGTGCAGAAGTGATCCCGGTTGGCAAGGAGGGGTCTTCTGAGAAGCCTGGATACATGGTTGTTGGGTTTGAGGTGATTCCTTGTAGTATTATGCATAATGCTGATTCTGCAAAAAACTTGAAGATGTATGACAAGTATCCGTCATCTATCCGATGTGATCCGGCCACTGTGGCAATGCCTATCAAGGAGGGCCAGCCTGTTGTTTTCACTTATGAGATCACCTTTGAGGAGAGTGACATCAAGTGGCCGTCTAGATGGGATGCTTACTTAAAGATGGAGGGAGCTAAAGTGCATTGGTTCTCTATCCTTAATTCGCTCATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTGATCTTCCTGAGGACAGTTAGAAGGGATCTGACCCGTTATGAGGAGCTCGATAAGGAGGCTCAAGCACAGATGAATGAAGAGTTATCTGGTTGGAAGCTTGTAGTGGGAGATGTTTTCCGCACTCCGACAAATCCTGCCTTGTTGTGTGTGATGGTTGGGGATGGAGTTCAGATTCTTGGGATGTCTGTTGTGACGATATTGTTTGCTGCACTTGGATTCATGTCACCGGCATCTCGGGGAACACTGATCACAGGTATGCTGTTTTTCTATATGATACTTGGTATTGCTGCTGGTTATGTCTCAGTTCGGATGTGGAGGACAATCAGCTTTGGCGAACAGAAGGGTTGGGTGTCAATTGCATGGAAAGCTGCGTGTTTCTTCCCAGGCATTTCCTTTTTGATCCTCACAACCTTGAACTTCCTATTGTGGGGAAGCCACAGCACTGGAGCCATTCCATTTTCACTCTTTGTAATACTAATCTTGCTTTGGTTCTGCATATCTGTACCCCTTACCATTGTTGGTGGCTACTTTGGAGCCAAGGCACCCCACATTGAGTATCCAGTCCGAACCAACCAAATTCCTCGCGAAATTCCCCAGCAGAAGTACCCATCATGGCTGTTAGTTCTTGGTGCTGGCACCCTTCCATTTGGCACCTTGTTCATTGAGCTCTTCTTTATCATGTCCAGCATTTGGATGGGTCGCGTTTACTACGTCTTTGGGTTTCTCTTCGTTGTTTTGATCCTTCTTGTGGTGGTTTGTGCCGAGGTATCTCTAGTTCTGACTTACATGCACCTGTGTGTGGAGGATTGGAAATGGTGGTGGAAATCGTTCTTTGCCTCCGGTTCTGTCGCCATATACATCTTTTTGTACTCTGTTAACTATCTTGTGTTTGACCTCAAGAGTTTGAGCGGTCCTGTGTCTGCAACTCTTTACTTAGGCTACTCACTCTTCATGGTTCTAGCAATCATGCTTTCTACAGGTACAATTGGGTTCCTCTCTTCATTCTGGTTCGTGCATTACTTGTTCTCTTCTGTCAAGTTGGATTGA 1983 0.4589 MESCAQFGLWVVLILCLAFQIQPNYGFYLPGSYPHNYDVTDELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGIKDSAENLGELLMGDRIENSPYRFRMYTNESEIYLCQIQALSGDQFKILKERIDEMYQVNLILDNLPAIRFTQKDGYFMRWTGYPVGIKIEDAYYVFNHLKFNVLVHKYEETNVARVMGTVEGAEVIPVGKEGSSEKPGYMVVGFEVIPCSIMHNADSAKNLKMYDKYPSSIRCDPATVAMPIKEGQPVVFTYEITFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRTPTNPALLCVMVGDGVQILGMSVVTILFAALGFMSPASRGTLITGMLFFYMILGIAAGYVSVRMWRTISFGEQKGWVSIAWKAACFFPGISFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTIVGGYFGAKAPHIEYPVRTNQIPREIPQQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFVVLILLVVVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLSTGTIGFLSSFWFVHYLFSSVKLD* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1684 660 Pfam Endomembrane protein 70 58 613 IPR004240 GO:0016021
Gso15g1684 660 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 11 660 IPR004240 GO:0016021
Gso15g1684 660 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 11 660 - -
Gso15g1684 660 Coils Coil 315 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1684 Gso-Chr15 26515805 26518721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1684 1 660 Miscellaneous Gene Families AT5G35160 83.964 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1684 K17086 - gmx:100819368 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1684 15 26515805 26518721 Gso9g0802 9 14478689 14481463 GST
Gso17g0879 17 8232513 8235158 Gso15g1684 15 26515805 26518721 PCT
Gso15g1684 15 26515805 26518721 Gso17g0879 17 8232513 8235158 PCT