Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1398 ATGACTGAAACAGCAGAATCTTCAGCTTACGGTGTGATGGCAAGTTGGTTCACACCCTCGTGTCTATTCCTCTTCATCAACCTCGTCATCGGCACCATCGCCATCATCTCTCGTTTCGCCAACACGACCAAAAGACAACACCAACTCGTCCGTTCTCCCTCTTTGCTAGAAAGGCTTGCGTCTCTCAACCTTTGTTATCACAAACAATATGAACCAACAACAACAACATTGCTTCACAGCCATGTGAACCCGGTCCAGAGTCGGGATGAATCCAGACTTGATAGGGTTAGGTCTTTCAATCTCGATTTTTATAACGTGGATAATATTGAAAGACCTGACCCAATTGAAAATTCTGACTCACCCCAACTAGACCGGGTTCCTTCCTCATCTTTGGGTCAGGTCAAGTTTTTCAATCTTAATATCTATAAATCAGAGATTGAAGGACTTGACCTAGTCCATAGGCCTGACTCATCCCAAATAGGCCGGGTTTCCTCCACGTCTTTGTTGGACCGAGTCAGGTCATTTAATCTCAACTTTAATAAAGTTGAGATTGAAAAGTCTAGCCGGGTCCAACAGCAAGTGACCCGTGCTCCCTCGATACTCGAGCGGCTTAAGTCGTCCTTGTCATTTGACAGATCGATGTCAGTGACCGAGCCTGAATCCGAAGTTACAGGTGGTGGAGAGTTGGTGGAGGAAACTGAAGAAGAAGGGGTGGATGCAAAGGCTGATGATTTCATCAATAGGTTTAGGCAGCAACTGAGGTTGCAAAGGCTTGACTCTATTATACGTTACAGGGATATGCTCAAACGATACTAA 816 0.4534 MTETAESSAYGVMASWFTPSCLFLFINLVIGTIAIISRFANTTKRQHQLVRSPSLLERLASLNLCYHKQYEPTTTTLLHSHVNPVQSRDESRLDRVRSFNLDFYNVDNIERPDPIENSDSPQLDRVPSSSLGQVKFFNLNIYKSEIEGLDLVHRPDSSQIGRVSSTSLLDRVRSFNLNFNKVEIEKSSRVQQQVTRAPSILERLKSSLSFDRSMSVTEPESEVTGGGELVEETEEEGVDAKADDFINRFRQQLRLQRLDSIIRYRDMLKRY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1398 271 Pfam Domain of unknown function (DUF4408) 8 39 IPR025520 -
Gso15g1398 271 Pfam Cotton fibre expressed protein 236 270 IPR008480 -
Gso15g1398 271 PANTHER DUF4408 DOMAIN PROTEIN 8 71 - -
Gso15g1398 271 PANTHER DUF4408 DOMAIN PROTEIN 231 270 - -
Gso15g1398 271 PANTHER COTTON FIBER (DUF761) 231 270 - -
Gso15g1398 271 PANTHER COTTON FIBER (DUF761) 8 71 - -
Gso15g1398 271 MobiDBLite consensus disorder prediction 214 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1398 Gso-Chr15 15332998 15334317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1398 - - gmx:102670321 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1398 15 15332998 15334317 Gso9g0536 9 6005460 6006697 GST
Gso13g0755 13 21863338 21864472 Gso15g1398 15 15332998 15334317 PCT
Gso15g1398 15 15332998 15334317 Gso13g0755 13 21863338 21864472 PCT