LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g0755	ATGATGGCAGACCCAGCAAGTTTCATAGCAAGCTGGTTAACTCCTTCTTACCTCTTCATCTTGGTCAACCTCGTCATAGGCACCATAGCCATCACTTCTCGCTTCAGTTCCACGCCCAAAAACCAACAAGCCCACCACCCCCAACCACTCAGCTCCTTCAATACCCATCATCACCAACCCAACTGCACTCAGCCCCAACTCCTTCCAATACCCTCACTGTTGCAGCGAGTCACGTCCTTCAACCTCTCCCTCCACAAACACCAACCCACACCTCCAGAAACACAACATCTGCATCCCGAACCCCAACCCCAACCTGAAAAGCCGCCGGAACTGCTTCGGACTCCCTCACTCTTGGAGCGACTCAGGTCCTTCCATAATCTTTCTCTCCACAAACATGTCCAACCCGAGCCAGAGCCAGAGCCAGAACCTGAACCTGAAAAGCCGGAACTGGTTCGGAGTCCCTCGCTCTTGCAGCGGATTCAGTCCATAAACTTCTCCCATCTCTACAGATCCGACTTCAGTCACCGAGATGATGAGGATCCGGATTCGGGTTCGGATCCGGGTCGCGGTTCGGGAAAGGCGGCGGAGATGAGGAAATCGGCGAGCGTGAGAGGGGGTTTGACGAATAGCGAGTGGGAGGAGGTCGAGAAGCGGAGGCCGCAGACGGCGAGGCCGGTTGAAACGACGACGTCGTGGAGAGAAGACGAAGAAGTAGACGCCAAAGCTGACGATTTCATCAACAGGTTCAAGAAACAGTTGAGGTTGCAGAGGATTGATTCCCTTCTCCGTTACAGAGGAGGTAACTCATCATGA	813	0.54	MMADPASFIASWLTPSYLFILVNLVIGTIAITSRFSSTPKNQQAHHPQPLSSFNTHHHQPNCTQPQLLPIPSLLQRVTSFNLSLHKHQPTPPETQHLHPEPQPQPEKPPELLRTPSLLERLRSFHNLSLHKHVQPEPEPEPEPEPEKPELVRSPSLLQRIQSINFSHLYRSDFSHRDDEDPDSGSDPGRGSGKAAEMRKSASVRGGLTNSEWEEVEKRRPQTARPVETTTSWREDEEVDAKADDFINRFKKQLRLQRIDSLLRYRGGNSS*	271

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso13g0755	270	Pfam	Cotton fibre expressed protein	235	265	IPR008480	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	168	238	-	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	131	151	-	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	131	149	-	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	170	186	-	-
	Gso13g0755	270	Pfam	Domain of unknown function (DUF4408)	7	35	IPR025520	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	94	110	-	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	84	111	-	-
	Gso13g0755	270	PANTHER	DUF4408 DOMAIN PROTEIN	180	266	-	-
	Gso13g0755	270	PANTHER	DUF4408 DOMAIN PROTEIN	142	179	-	-
	Gso13g0755	270	PANTHER	DUF4408 DOMAIN PROTEIN	2	89	-	-
	Gso13g0755	270	PANTHER	COTTON FIBER (DUF761)	142	179	-	-
	Gso13g0755	270	PANTHER	COTTON FIBER (DUF761)	2	89	-	-
	Gso13g0755	270	PANTHER	COTTON FIBER (DUF761)	180	266	-	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	39	66	-	-
	Gso13g0755	270	MobiDBLite	consensus disorder prediction	210	238	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g0755	Gso-Chr13	21863338	21864472	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g0755	-		-	gmx:102664184	465.307

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso13g0755	13	21863338	21864472	Gso15g1398	15	15332998	15334317	PCT
	Gso13g0755	13	21863338	21864472	Gso9g0536	9	6005460	6006697	PCT
	Gso15g1398	15	15332998	15334317	Gso13g0755	13	21863338	21864472	PCT
	Gso9g0536	9	6005460	6006697	Gso13g0755	13	21863338	21864472	PCT