Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1210 ATGGGTGTTTTTGCTTACGATGAAGAAAACTCCTCCACCGTGGCTCCGGTTACTCTCTACAAAGCTCTGACGAAAGATGCCGACACCATCATCCCAAAGATTATTGGTGCCATCCAAAGTATTGAAATTGTTGAAGGAAATGGAGGACCCGGAACCGTCAAGAAGATAACCGCTAATGAAGGATATATGTTAATAGCAAGACGAGATGCAATCGACGAGGCTAACTTGGTATACGACTACAGCATAGTGGGAGGGACGGGGTTGCATGAAAGTTTGGAGAAAGTTACATTCCAGACAAAGGTGGCTCCTGGCCCTGATGGTAATGGCTCCATCGCCAAGGCCACTCTCACATTCCACACCAAAGGTGTTGCACCCCTCTCAGATGCAGTGCGTGATGAGACAAAGGCCAGGGGTGCTGGAATTTTCAAGGCCATTGAGGGCTACGTTTTGGCAAATCCTGCTTAA 465 0.4796 MGVFAYDEENSSTVAPVTLYKALTKDADTIIPKIIGAIQSIEIVEGNGGPGTVKKITANEGYMLIARRDAIDEANLVYDYSIVGGTGLHESLEKVTFQTKVAPGPDGNGSIAKATLTFHTKGVAPLSDAVRDETKARGAGIFKAIEGYVLANPA* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1210 154 PANTHER ABA-RESPONSIVE PROTEIN 1 154 - -
Gso15g1210 154 Pfam Pathogenesis-related protein Bet v 1 family 1 152 IPR000916 GO:0006952
Gso15g1210 154 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso15g1210 154 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso15g1210 154 PRINTS Major pollen allergen Bet V1 signature 62 81 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso15g1210 154 PRINTS Major pollen allergen Bet V1 signature 81 94 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso15g1210 154 PRINTS Major pollen allergen Bet V1 signature 107 123 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso15g1210 154 PRINTS Major pollen allergen Bet V1 signature 141 151 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso15g1210 154 Gene3D - 2 154 IPR023393 -
Gso15g1210 154 SUPERFAMILY Bet v1-like 5 153 - -
Gso15g1210 154 PANTHER - 1 154 - -
Gso15g1210 154 CDD Bet_v1-like 6 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1210 Gso-Chr15 12091521 12093350 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1210 - - gmx:100811185 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1210 15 12091521 12093350 Gso9g0342 9 3310509 3311851 GST
Gso15g1210 15 12091521 12093350 Gso7g2058 7 44539903 44540831 PCT