Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0278 ATGGCATACAAGGCGTTTTTTCTCCTCGGCCTCTTTCTTAGCACATTAGCATCAGTTACTTTTGCGGAAGCTGTTGCAGCTATTCTGGATGTTTCTTCACTCAATCGAAGCAGCTTCCCACAAGGCTTCATTTTTGGGACAGCATCCGCGGCGTACCAGTATGAAGGTGCAGCAAAAGAAGACGGTAAAGGAGCCAGTATATGGGATACTTTCACCCACAAATATCCAGATAAAATACAAGATAGAAGCAATGGAGATATCGCAGTTGATCAATATCACCGTTACAAGGAAGATGTTCAAATCATGAAATATATGAATTTGGATGCATACAGGTTCTCCATCTCTTGGTCTAGAATCCTCCCAAAAGGAAAGCTTAGTGGAGGTATAAACCAAGAAGGAGTCAAATACTACAACAACCTTATCAATGAACTGCTAGCTAATGGTCTACAACCATTTGTGACCCTTTTTCATTGGGATCTTCCCCAGACTTTGGAAGACGAGTATGGCGGCTTCCTAAGCCCTCGCATTATAAATGATTTCCAAGACTATACAGAACTTTGTTTCAAAGAATTTGGAGATAGGGTGAAGCATTGGATTACTATAAATGAGCCATGGAGTTATAGCATATTTGGTTATGCAACTGGGATGATGCCGCCAAGTCGATGCTCTAAATGGCTAAATCCAAATTGCATGGATGGTGATTCAGGGAAAGAGCCTTATTTAGTTTCACATCATTTACTTCTTGCTCATGCAGCAGTTGTCAAAATGTACAAGAAAAAGTATCAGGCATCTCAAAAAGGAGTGATAGGCATAACCATAGTGTCTAATTGGTTTGAGGCATATTCAAATAACAAATTAGATAAATATGCTGCCCAACGAGCAATTGATTTCATGTTTGGATGGTTTATGGAACCATTGACATCAGGAAATTATCCACAAAGTATGCGTTCTCTACTTGGTAGACGATTGCCAAAGTTCACTAAACAACAAGTCAAGCTTATCAATGGCTCATTTGATTTTCTTGGCCTAAACTATTATACCTCTAACTATGTTGTCAATGCACCTAAGTTAAGCAATGGCAAACCTAATTACGCTACAGATTCTAATGCCAATCTTACAACTCAACGCAACGGGACTCCTATAGGTCCAATGGCGGCTTCAAATTGGTTATATGTGTATCCCAAAGGAATTAGAGAATTGTTGCTCTATACCAAAGAAAAGTACAACAATCCTTTAATTTATATCACTGAAAATGGCATTGATGAGTTCAATGATCCAACCTTGTCCCTTGAGGAAGCCCTTTTAGATTCTTTTAGAATAGACTATCATTATCGTCATCTCTTTTATCTTCATTCAGCAATTAGGGATGGCGTAAACGTAAAAGGATATTTTGCATGGTCATTGCTGGACAACTTTGAATGGAACAATGGCTATAAAGTGCGATTTGGAATAAACTTTGTAGATTACAAAAATGGTTTGAAGCGATATCAAAAGCTCTCAGCAAAATGGTTCAAAAATTTTCTTAAAAAATATTAG 1536 0.3809 MAYKAFFLLGLFLSTLASVTFAEAVAAILDVSSLNRSSFPQGFIFGTASAAYQYEGAAKEDGKGASIWDTFTHKYPDKIQDRSNGDIAVDQYHRYKEDVQIMKYMNLDAYRFSISWSRILPKGKLSGGINQEGVKYYNNLINELLANGLQPFVTLFHWDLPQTLEDEYGGFLSPRIINDFQDYTELCFKEFGDRVKHWITINEPWSYSIFGYATGMMPPSRCSKWLNPNCMDGDSGKEPYLVSHHLLLAHAAVVKMYKKKYQASQKGVIGITIVSNWFEAYSNNKLDKYAAQRAIDFMFGWFMEPLTSGNYPQSMRSLLGRRLPKFTKQQVKLINGSFDFLGLNYYTSNYVVNAPKLSNGKPNYATDSNANLTTQRNGTPIGPMAASNWLYVYPKGIRELLLYTKEKYNNPLIYITENGIDEFNDPTLSLEEALLDSFRIDYHYRHLFYLHSAIRDGVNVKGYFAWSLLDNFEWNNGYKVRFGINFVDYKNGLKRYQKLSAKWFKNFLKKY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0278 511 PANTHER GLYCOSYL HYDROLASE 1 510 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 Pfam Glycosyl hydrolase family 1 37 510 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 1 510 - -
Gso15g0278 511 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 PRINTS Glycosyl hydrolase family 1 signature 413 421 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 PRINTS Glycosyl hydrolase family 1 signature 436 447 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 PRINTS Glycosyl hydrolase family 1 signature 457 474 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 PRINTS Glycosyl hydrolase family 1 signature 481 493 IPR001360 GO:0004553|GO:0005975
Gso15g0278 511 Gene3D Glycosidases 19 510 - -
Gso15g0278 511 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Gso15g0278 511 SUPERFAMILY (Trans)glycosidases 28 509 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0278 Gso-Chr15 2535516 2540859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0278 34 504 Glycoside Hydrolase AT5G42260 57.203 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0278 - K01188 gmx:100811884 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0278 15 2535516 2540859 Gso12g0449 12 3945744 3948616 PCT
Gso15g0278 15 2535516 2540859 Gso11g1102 11 9873262 9876432 PCT