Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0191 ATGACGACGAGGCTCCTTAGAACGATCTTCATCGCCCACAAGCTCCACCTCCGCAACCCCAAATGTATTTTCCCACCTCTCCTTTCCCGCCACTCCTCCACGGCCACAAATTCCTCCGAGGCCCGCGAACCAGCAAAGGAAACCACCACCACCACCACCACCACCAGTTGGAGCATGTACGGAAACGTCTACGACCGCCCAATTGCGCAGCGCGAGCTAAACGACCACAGCGACGGAGACGAAAACCCTAGCAGCGGGAGAGCAGCAAAGAGTGTAGCAGTAGTGACGAAGATAAAGGGAAAGGGGAAGGTGAAAACTCAGTGGGTGTGCTGCAGTTGCGGCCACTCAACAGGAAAATGGTGGGGGCAATGCCCCGAATGCGAAATGGTTGGCACAATGAACGAGTTTCATGAGAGCAAATTGACTGACAGCAAGTCCAGAGGTGGGTTAGAAGTTTCCGAGGATGCAGTGGGCTTGTGGCTCCCGCAACGACCCGAAGACTTGCGCCCCGTCAAATTGGAAGAGGTGAACCGTGGATTCAATTACCAGCAATGGAGAATACCTTTGTCTGGTTCTTTTGGAAATGAAGTTTCTACAGTGCTTGGTGGAGGTCTTGTACCAGGTTCTTTAACTTTAGTTGGTGGTGATCCTGGTATTGGGAAAAGTACACTGCTGTTGCAGATTGCAGCAATGATAGCAAATGAATGCAGTGACTATGAAGGACCTCCAGTTGTATATGTCTCTGGTGAAGAGAGCCTTCAGCAAATTGGTATTAGAGCAGATCGCCTTGGGATTAAGTCCAATATTTATTTATATTCAAGTACTGATATAGAGGACATATTGACGAAGACTCATGGTCTATCCCCTCGTGCTCTGGTGGTTGATTCAATACAAACTGTTTACCTGAAAACTATAATAGGAAGTGCTGGAGGGATTATGCAGGTGAAGGAATGTACTGCAGCTTTGATGCGATTTGCAAAAACAACTAACATCTCAGTTTTTTTGATTGGACATGTGACTAAGTCTGGAGACATAGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTATATATGGAAGGCGAGAAGTACTCTCCATATCGAATGCTTCGAGCTGTGAAAAATCGGTTTGGATCCACTGATGAGCTTGCAGTTCTTGAGATGTCGCAGTCAGGACTCCAGGTTGTTTCAAATGCCAGTGAAATGTTTCTCACTCAACAACACTCCGATTCAAATGTTTTAGCTGGGCTTGCTATTGCTGTAATAATGGATGGTTCAAGAACTTTTTTAATTGAAATTCAGGCACTTTGCCTTACACATTGCCCAGTTTCGAGTTCACTATCTAATGGGATCAATGCCAACAAAGCTAATATTATTAAATGTGTACTTATAAAGCAAACAGGCCTCCATCTTCAAGATAATGCCGTGTTTTTGAATGTTGTTAGTGGAATGACAGTGACAGAGACTGCTGGAGATCTTGCAATAGCAGCTGCAATTTGCAGCAGTTTCTTGGAGTTCCCAATTCCAGAGGGGACTGCATTCATTGGTGAAATTGGCCTTGGTGGAGAGCTTCGCATGGTTCCTAGAATTGAAAAAAGGGTTAACACATTGGTGAAGTTGGGTTACAGAATGTGTGTAGTACCAAAGCAGGCTGAAAAACTTTTAGAAACCGAAGGTCTAGGAAAGATGAAAGTTGTAGGTTGCAAGGATCTGAAAGAGGTTATTAACGCTGTATTCAGTAGAAATAATTAA 1758 0.4494 MTTRLLRTIFIAHKLHLRNPKCIFPPLLSRHSSTATNSSEAREPAKETTTTTTTTSWSMYGNVYDRPIAQRELNDHSDGDENPSSGRAAKSVAVVTKIKGKGKVKTQWVCCSCGHSTGKWWGQCPECEMVGTMNEFHESKLTDSKSRGGLEVSEDAVGLWLPQRPEDLRPVKLEEVNRGFNYQQWRIPLSGSFGNEVSTVLGGGLVPGSLTLVGGDPGIGKSTLLLQIAAMIANECSDYEGPPVVYVSGEESLQQIGIRADRLGIKSNIYLYSSTDIEDILTKTHGLSPRALVVDSIQTVYLKTIIGSAGGIMQVKECTAALMRFAKTTNISVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSPYRMLRAVKNRFGSTDELAVLEMSQSGLQVVSNASEMFLTQQHSDSNVLAGLAIAVIMDGSRTFLIEIQALCLTHCPVSSSLSNGINANKANIIKCVLIKQTGLHLQDNAVFLNVVSGMTVTETAGDLAIAAAICSSFLEFPIPEGTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEKLLETEGLGKMKVVGCKDLKEVINAVFSRNN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0191 585 SMART AAA_5 207 365 IPR003593 -
Gso15g0191 585 Gene3D - 409 585 IPR014721 -
Gso15g0191 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 390 IPR027417 -
Gso15g0191 585 Gene3D - 196 398 IPR027417 -
Gso15g0191 585 PRINTS DNA repair protein radA signature 110 134 - -
Gso15g0191 585 PRINTS DNA repair protein radA signature 199 227 - -
Gso15g0191 585 PRINTS DNA repair protein radA signature 295 319 - -
Gso15g0191 585 PRINTS DNA repair protein radA signature 334 362 - -
Gso15g0191 585 PRINTS DNA repair protein radA signature 369 395 - -
Gso15g0191 585 PRINTS DNA repair protein radA signature 445 468 - -
Gso15g0191 585 Pfam AAA domain 199 343 - -
Gso15g0191 585 PANTHER DNA REPAIR PROTEIN RADA 4 585 - -
Gso15g0191 585 ProSiteProfiles RecA family profile 1. 186 339 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gso15g0191 585 MobiDBLite consensus disorder prediction 33 53 - -
Gso15g0191 585 PANTHER DNA REPAIR-LIKE PROTEINRADA 4 585 - -
Gso15g0191 585 SUPERFAMILY Ribosomal protein S5 domain 2-like 376 582 IPR020568 -
Gso15g0191 585 Pfam Subunit ChlI of Mg-chelatase 466 552 - -
Gso15g0191 585 TIGRFAM sms: DNA repair protein RadA 103 575 IPR004504 GO:0003684|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0191 Gso-Chr15 1636145 1646002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0191 K04485 - gmx:100791181 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0191 15 1636145 1646002 Gso8g1656 8 16212501 16219656 PCT
Gso8g1656 8 16212501 16219656 Gso15g0191 15 1636145 1646002 PCT