Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0190 ATGCTGGATTCTGCCACTCCCCATGACAAAATCACCACAGCAGCTTCTGGCTTCGTACTTGAGGATGTTCCTCATCTATCTGCTTACATCCCTCACCTCCAAACATATCCTGACCCGTTGCAAGACAATCCTTCCTATTCTGTTGTTGCGCAATATTACGTGAATGTGGATGATACAATTGCACAACAGATAGTTGTACACAAAAATAGTCCAAGAGGGACCCATTTTCGTCGTGCTGGGCCTGCTCAGAAGGTATATTTTGATTCAGAGGAAGTACACGCTTGTATTGTCACGTGCGGTGGACTTTGTCCTGGTCTAAATACAGTGATAAGAGAAATAGTATGCGGCTTATATCATATGTATGGGGTGCACAAAGTTTTGGGAATACAGGGAGGATATCCAGGTTTTTATTCTCGAAATACAGTTCCTTTGACACCAAAGGTTGTGAATGATATCCACAAACGTGGTGGAAGCATCCTTGGGACATCATATGGAGGCCATGACACCTCAAAGATTGTTGATAGCATTCAGGACCGGGGAATTAATCAGGTTTATATACTTGGAGGATATGGAACTCAGTATGAAGCAGCTATGATTTTTGAGGAAGTTAGAAGGCGTGGCTTGAAAGTTGCAGTGGTCGGAATTCCAAAAACTATTGACAATGATATCCCAGTTATTGACAAATCAATTGGTTTCGACACTGCTGTTGAAGAGGCACAACGAGCAATCAATTCTGCTCATGTGGAAGCAGAAAGCGCGGAGAATGGAATTGGTGTTGTAAAATTAATGGGGCGTTACAGTGGATTTATCGCCATGTATGCAACTCTTGCCAGCCGTGATGTTGATTGTTGCTTGATTCCAGAATCACCCTTTTACCTGGAGGGTCCAGGAGGACTGTTGGAGTTCATTGAGAAAAGACTCAAAGAGCAAGGTCACATGGTTATAGTCATAGCTGAAGGTGCAGGTCAGGAGCTTCTTTCTGGCAACCCCTCCATTGTTAATAAGCCAGATGCTTCTGCAGACAAATTATTTCCAGATGTTGGCCTGTGGTTGTCCCAGAAAATTAAGGATCACTTTGAAAAACGTCAAAAAATGGCTATAAATCTGAAGTACATAGATCCTACTTACATGATCCGTGCTATCCCAAGTAATGCATCTGATAATGTATACTGCACCCTCCTTGCCCAAAGTGCTGTTCATGGTGCAATGGCAGGATACACAGGCTTCACCGTGGGCCCAGTTAATGGCAGAAATTGTTACATTCCATTCCATCTGATAAACGAGGGAGAGAAGAGGGTTGTGATAACTGATCGGATGTGGGCAAGGTTGCTATCTTCAACCCATCAGCCTTGCTTCTTGAACCCAAAAGAAATCACAGGAGAAAGAGAGGAAAGAACGGAAAACCAAACCACAGATGGGCAGAACCATTCAGAAATAGCAGACTAA 1446 0.4343 MLDSATPHDKITTAASGFVLEDVPHLSAYIPHLQTYPDPLQDNPSYSVVAQYYVNVDDTIAQQIVVHKNSPRGTHFRRAGPAQKVYFDSEEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVHKVLGIQGGYPGFYSRNTVPLTPKVVNDIHKRGGSILGTSYGGHDTSKIVDSIQDRGINQVYILGGYGTQYEAAMIFEEVRRRGLKVAVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAINSAHVEAESAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGPGGLLEFIEKRLKEQGHMVIVIAEGAGQELLSGNPSIVNKPDASADKLFPDVGLWLSQKIKDHFEKRQKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHLINEGEKRVVITDRMWARLLSSTHQPCFLNPKEITGEREERTENQTTDGQNHSEIAD* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0190 481 Coils Coil 236 256 - -
Gso15g0190 481 MobiDBLite consensus disorder prediction 457 471 - -
Gso15g0190 481 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 8 477 - -
Gso15g0190 481 PANTHER - 8 477 - -
Gso15g0190 481 Gene3D - 88 278 - -
Gso15g0190 481 PIRSF ATP_PFK_TP0108 11 457 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gso15g0190 481 Pfam Phosphofructokinase 95 400 IPR000023 GO:0003872|GO:0006096
Gso15g0190 481 SUPERFAMILY Phosphofructokinase 28 456 IPR035966 GO:0003872|GO:0006096
Gso15g0190 481 MobiDBLite consensus disorder prediction 455 481 - -
Gso15g0190 481 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 23 453 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gso15g0190 481 PRINTS ATP-dependent phosphofructokinase family signature 96 115 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso15g0190 481 PRINTS ATP-dependent phosphofructokinase family signature 180 196 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso15g0190 481 PRINTS ATP-dependent phosphofructokinase family signature 213 230 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso15g0190 481 PRINTS ATP-dependent phosphofructokinase family signature 231 249 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso15g0190 481 PRINTS ATP-dependent phosphofructokinase family signature 252 268 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso15g0190 481 PRINTS ATP-dependent phosphofructokinase family signature 309 321 IPR022953 GO:0003872|GO:0006002|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0190 Gso-Chr15 1632150 1636354 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0190 K00850 - gmx:100815278 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0190 15 1632150 1636354 Gso11g3624 11 51899841 51903727 GST
Gso15g0190 15 1632150 1636354 Gso7g0123 7 1126594 1131025 PCT
Gso15g0190 15 1632150 1636354 Gso8g1657 8 16219902 16224927 PCT
Gso7g0123 7 1126594 1131025 Gso15g0190 15 1632150 1636354 PCT
Gso8g1657 8 16219902 16224927 Gso15g0190 15 1632150 1636354 PCT