Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3624 ATGCTGGATTGTGTCACTTCCCATGACAAAATCACCACAGCAGCTTCTGGCTTCGTACTTGAGGATGTTCCTCATCTATCTGATTACATCCCTCTCCTCCAAACATATCCTGACCCGTTACAAGACAATCCTTCCTATTCTGTTGTTGCGCAATACTACGTGAATGTGGATGATACAATTGCGCAACAGATAGTTGTACACAAAAATAGTCCAAGAGGGACCCATTTTCGTCGTGCTGGGCCTGCTCAGAAGGTATATTTTGATTCAGAGGAAGTGCACGCTTGTATTGTCACGTGCGGTGGACTTTGTCCTGGTCTAAATACAGTGATAAGAGAAATAGTATGCGGCTTATATCATATGTATGGGGTGCACAAAGTTTTGGGAATACAGGGAGGATATCCAGGTTTTTATTCTCGAAATACAGTGCCTTTGACACCAAAGGTTGTGAACGACATACACAAACGTGGTGGAAGCATCCTTGGTACATCATATGGAGGACATGACACCTCAAAGATTGTTGATAGCATTCAGGACCGGGGCATTAATCAGGTTTATATACTTGGAGGATATGGAACTCAGTATGAAGCAGCTATGATTTTTGAGGAAGTTAGAAGGCGTGGCTTGAAAGTTGCAGTGGTCGGAATTCCAAAAACTATTGACAATGATATCCCAGTTATTGACAAGTCTATTGGTTTCGACACTGCTGTTGAAGAGGCACAACGAGCAATCAATTCTGCTCATGTGGAAGCAGAAAGCGCTGAGAATGGAATTGGTGTTGTAAAATTAATGGGGCGTTACAGTGGATTTATCGCCATGTATGCAACTCTTGCCAGCCGTGATGTGGATTGTTGCCTGATTCCCGAATCACCCTTTTACCTGGAGGGTCCAGGAGGCCTGTTGGAGTTCGTTGAGAAAAGACTCAAAGAACAAGGGCACATGGTTATAGTGATAGCTGAAGGTGCAGGTCAGGAGCTTCTTTCTGGCAACCCATCTATTGTTAATAAGCAGGATGCTTCCGCCGACAAGTTATTTCCAGATGTTGGCCTGTGGTTGTCCCAGAAAATTAAGGATCACTTTGAAAAACGTCAAAAAATGGCTATAAATCTGAAGTACATAGATCCTACATACATGATCCGTGCTATCCCAAGTAATGCATCTGATAATGTATACTGCACCCTCCTTGCCCAAAGTGCTGTCCATGGTGCAATGGCAGGATACACAGGCTTCACCGTAGGCCCAGTTAATGGCAGAAACTGTTACATTCCATTTCATCTTATAAACGAGGGAGAGAAGAGGGTTGTGATAACTGATCGGATGTGGGCAAGGTTATTATCTTCAACCCATCAGCCTAGCTTCTTGAATCCAAAAGATATCACAGGTGAAAGAGAGGAAAGAACGGTAAACCAAACCACAGATGGGCAGAACCATTCAGAAACAGCAGACTAA 1446 0.4364 MLDCVTSHDKITTAASGFVLEDVPHLSDYIPLLQTYPDPLQDNPSYSVVAQYYVNVDDTIAQQIVVHKNSPRGTHFRRAGPAQKVYFDSEEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVHKVLGIQGGYPGFYSRNTVPLTPKVVNDIHKRGGSILGTSYGGHDTSKIVDSIQDRGINQVYILGGYGTQYEAAMIFEEVRRRGLKVAVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAINSAHVEAESAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGPGGLLEFVEKRLKEQGHMVIVIAEGAGQELLSGNPSIVNKQDASADKLFPDVGLWLSQKIKDHFEKRQKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHLINEGEKRVVITDRMWARLLSSTHQPSFLNPKDITGEREERTVNQTTDGQNHSETAD* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3624 481 Coils Coil 236 256 - -
Gso11g3624 481 PANTHER - 6 476 - -
Gso11g3624 481 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 6 476 - -
Gso11g3624 481 Gene3D - 88 278 - -
Gso11g3624 481 MobiDBLite consensus disorder prediction 452 481 - -
Gso11g3624 481 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 23 453 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gso11g3624 481 PIRSF ATP_PFK_TP0108 6 457 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gso11g3624 481 PRINTS ATP-dependent phosphofructokinase family signature 96 115 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso11g3624 481 PRINTS ATP-dependent phosphofructokinase family signature 180 196 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso11g3624 481 PRINTS ATP-dependent phosphofructokinase family signature 213 230 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso11g3624 481 PRINTS ATP-dependent phosphofructokinase family signature 231 249 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso11g3624 481 PRINTS ATP-dependent phosphofructokinase family signature 252 268 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso11g3624 481 PRINTS ATP-dependent phosphofructokinase family signature 309 321 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso11g3624 481 SUPERFAMILY Phosphofructokinase 28 457 IPR035966 GO:0003872|GO:0006096
Gso11g3624 481 Pfam Phosphofructokinase 95 400 IPR000023 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3624 Gso-Chr11 51899841 51903727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3624 K00850 - gmx:100796769 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0190 15 1632150 1636354 Gso11g3624 11 51899841 51903727 GST
Gso11g3624 11 51899841 51903727 Gso7g0123 7 1126594 1131025 PCT
Gso11g3624 11 51899841 51903727 Gso8g1657 8 16219902 16224927 PCT
Gso7g0123 7 1126594 1131025 Gso11g3624 11 51899841 51903727 PCT
Gso8g1657 8 16219902 16224927 Gso11g3624 11 51899841 51903727 PCT