Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1296 ATGCAGATACGAACCTGCCACTCCATCACCACCCAAACCCTTCCACAACTTCCGTGTTCTTCTAGAAAAGCCCACCACCGCCACCTTCTTCCGCCGTTAAACGCTGCGGTTTCCGCGGCGCCGTTCAAAGCCCGGAAGGCCCACTCAATGCCTCCAGAAAAGAAAGAAATTTTCAAGTCCTTGGAGGGATGGGCCTCGGAGTGGGTCCTACCGCTGCTGAAGCCCGTGGAGCAATGCTGGCAGCCACAAAACTTCCTCCCTGACCCCTCCCTTCCGCATGAAGAGTTCAGCCATCAGGTGAAGGAGCTTCGCGAACGCACTAAAGAGTTACCTGATGAGTACTTTGTGGTGCTGGTGGGTGATATGGTCACCGAGGACGCGCTTCCCACTTACCAGACCATGATCAACAACCTTGATGGAGTGAAAGATGACAGCGGCACGAGCCCGAGCCCGTGGGCCGTGTGGACCCGGGCCTGGACCGCCGAGGAAAACAGACACGGGGATCTGCTCAGAACTTATTTGTATCTCTCTGGGAGGGTTGACATGGCTAAGGTCGAAAAGACCGTACATTACCTCATTTCAGCTGGCATGGACCCTGGGACAGACAACAACCCATATTTGGGGTTTGTGTACACGTCATTCCAAGAGCGAGCAACATTTGTGGCGCACGGGAACACGGCTCGGCTCGCGAAGGAGGGCGGGGATCCAGTGCTGGCGCGCCTATGCGGGACCATCGCAGCGGACGAGAAGCGGCACGAGAACGCGTACTCAAGAATCGTGGAGAAGCTTCTGGAAGTGGACCCCACCGGGGCAATGGTGGCCATAGGGAACATGATGGAGAAGAAGATCACGATGCCGGCGCACCTTATGTACGATGGGGATGACCCCAGGCTATTCGAGCACTACTCCGCTGTGGCGCAGCGCATAGGCGTGTACACCGCCAACGACTACGCAGACATCTTGGAGTTTCTCGTTGAACGGTGGAGATTGGAGAAGCTTGAAGGATTGATGGCTGAGGGGAAGCGGGCGCAGGATTTCGTGTGTGGGTTGGCGCCGAGGATTAGGAGGTTGCAAGAGCGCGCTGATGAGCGAGCGCGTAAGATGAAGAAGCATCATGGCGTTAAGTTCAGTTGGATTTTCAATAAAGAATTGCTTTTGTGA 1161 0.5573 MQIRTCHSITTQTLPQLPCSSRKAHHRHLLPPLNAAVSAAPFKARKAHSMPPEKKEIFKSLEGWASEWVLPLLKPVEQCWQPQNFLPDPSLPHEEFSHQVKELRERTKELPDEYFVVLVGDMVTEDALPTYQTMINNLDGVKDDSGTSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMAKVEKTVHYLISAGMDPGTDNNPYLGFVYTSFQERATFVAHGNTARLAKEGGDPVLARLCGTIAADEKRHENAYSRIVEKLLEVDPTGAMVAIGNMMEKKITMPAHLMYDGDDPRLFEHYSAVAQRIGVYTANDYADILEFLVERWRLEKLEGLMAEGKRAQDFVCGLAPRIRRLQERADERARKMKKHHGVKFSWIFNKELLL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1296 386 Gene3D Ribonucleotide Reductase, subunit A 38 386 IPR012348 GO:0016491
Gso14g1296 386 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 27 385 - -
Gso14g1296 386 ProSitePatterns Fatty acid desaturases family 2 signature. 303 322 IPR005803 GO:0006633|GO:0016491
Gso14g1296 386 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 27 385 IPR005067 GO:0006631|GO:0045300
Gso14g1296 386 CDD Acyl_ACP_Desat 53 361 IPR005067 GO:0006631|GO:0045300
Gso14g1296 386 Pfam Fatty acid desaturase 53 380 IPR005067 GO:0006631|GO:0045300
Gso14g1296 386 PIRSF Dlt9_acylACP_des 6 386 IPR005067 GO:0006631|GO:0045300
Gso14g1296 386 SUPERFAMILY Ferritin-like 43 385 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1296 Gso-Chr14 35113439 35116124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1296 4 384 Acyl Lipid Metabolism Gene Families AT1G43800 73.057 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1296 K03921 - gmx:100037478 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1296 14 35113439 35116124 Gso13g0222 13 11938247 11940973 GST