Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0222 ATGCAGATACAAACCCTCCCACTTGCATCCCCGGCTCCAAGAATCACCCGGCACCACTTTCCGCGGCCACCGAAATGCGCAGTTACCGCCACACCGCCGCCATTGAAGGAGAGGAGAAACCACTCAATGCCGCCGGAAAAGATAGAGATTTTCAAGTCCCTGGAGGGATGGGCCTCACAGCGGGTCTTACCGCTGCTGAAGCCCGTGGAGCAATGCTGGCAGCCCCAGAAGTTCCTCCCTGACTCGACCCTACCCTTCGATGAGTTCATCGAAGCGGTGAGGTCGCTTCGCCACCGCACCAAGGAGCTATCTGACGAGTACTTCTTAGTGCTGGTGGGTGACATGGTCACGGAAGAAGCGCTTCCCACTTACCAGACCATAATGAGTGGCCTGGATGGGGTGGGAGACAAGTGCGGATCAAACCCAAGCCCGTGGGCCGTGTGGACCCGGGCCTGGTCCGCGGAGGAAAACAGACACGGGGATTTGCTCAGAACTTATTTGTATCTTTCTGGTCGTGTTGACATGAAGATGATCGAGAGGACTATCCACAACCTCATAGCAGCTGGCATGGACCCTGGTTTCGAGAACAACCCGTATTTGGGGTTTGTGTATACTTCATTCCAAGAGCGAGCGACGTTCGTGTCCCACGGCAACACAGCTCGGCTTGCGAAGGAGGGTGGTGATCCAGTGCTGGCGTGCATATGCGGGACCATCGCAGCGGACGAGAAGCGGCACGAGAATGCGTACTCAAGAATCGTCGAGAAGCTTCTAGAAGTGGATCCCACCGGGGCAATGTTGGCCATAGGAACCACGATGGAGAAGAAGATCACGATGCCGGCGCACCTTATGTACGATGGGGAGGACCCCAGGCTATTCGAGCACTACTCCACGGTGGCGCAGCGAATGGGCGTTTACACGGCCAAAGACTACGCGGACATCTTGGAGTTTCTGATCGGACGGTGGAGATTGGAGAAGCTGGAAGGTTTGACGGCTGAGGGAAAGAGGGCGCAGGATTTTGTGTGTGGGTTAGCACCGAGGATTAGGAAGTTGCAAGAGCGTGCTGATGAGCGAGCGCGTAAGATGAAGCCTCATGGAGTTAAGTTTAGCTGGATCTTCAATAAAGAGCTGCATTTGTGA 1137 0.555 MQIQTLPLASPAPRITRHHFPRPPKCAVTATPPPLKERRNHSMPPEKIEIFKSLEGWASQRVLPLLKPVEQCWQPQKFLPDSTLPFDEFIEAVRSLRHRTKELSDEYFLVLVGDMVTEEALPTYQTIMSGLDGVGDKCGSNPSPWAVWTRAWSAEENRHGDLLRTYLYLSGRVDMKMIERTIHNLIAAGMDPGFENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLACICGTIAADEKRHENAYSRIVEKLLEVDPTGAMLAIGTTMEKKITMPAHLMYDGEDPRLFEHYSTVAQRMGVYTAKDYADILEFLIGRWRLEKLEGLTAEGKRAQDFVCGLAPRIRKLQERADERARKMKPHGVKFSWIFNKELHL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0222 378 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 29 378 - -
Gso13g0222 378 MobiDBLite consensus disorder prediction 1 41 - -
Gso13g0222 378 PIRSF Dlt9_acylACP_des 14 378 IPR005067 GO:0006631|GO:0045300
Gso13g0222 378 Pfam Fatty acid desaturase 46 372 IPR005067 GO:0006631|GO:0045300
Gso13g0222 378 Gene3D Ribonucleotide Reductase, subunit A 32 378 IPR012348 GO:0016491
Gso13g0222 378 CDD Acyl_ACP_Desat 46 354 IPR005067 GO:0006631|GO:0045300
Gso13g0222 378 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 29 378 IPR005067 GO:0006631|GO:0045300
Gso13g0222 378 SUPERFAMILY Ferritin-like 35 376 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0222 Gso-Chr13 11938247 11940973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0222 11 378 Acyl Lipid Metabolism Gene Families AT1G43800 71.582 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0222 K03921 - gmx:100816146 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1296 14 35113439 35116124 Gso13g0222 13 11938247 11940973 GST