Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0869 ATGGGAGAAGCTCCAGAGGTGTTCTACATTAATGGGTTCTCAAAGTTTGGCCATGAAATTGAAACCCAACAAAACCATGTCAATGATCAGAACCATGATTCTTCTTGGTACGAGGAAATCATCGATGATGATCTCAAATGGTCTTTTAAACTCAACAGTGTGCTCCATAAAGCCATTAGCGAGTACCAGGACATAGCTCTCTTAGATACAAAACGTTTTGGAAAGGCCTTGGTGCTTGATGGGAAGATGCAGAGTGCTGAAACGGACGAATTTGTTTATCATGAATGCTTGATTCATCCACCTCTTTTATGCCACCCTAACCCCAAGACTGTGTTTATAATGGGGGGAGGTGAAGGTTCTGCTGCTAGGGAAGCCCTTAAGCACAGGTCAATGGACAGAGTGATCATGTGCGATATAGACAAGGAGGTGGTAAATTTTTGCCGAAAATACTTGATTGTAAATAAGGAGGCGTTTTCTCATAAGAAGCTGGACCTTGTCATCAATGATGCCAAGGCTGAATTGGAGAAGAGAAAGGAAAAGTTTGATATCATTGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCATGCTATCAACTCTACACCAAATCCTTCTATGAGAAGATCCTGAAGCCCAAGCTCAATGATAATGGCATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAGGAGGTCTTCACTTCTATATATAACACGATCAAACAGGTTTTCAAATATGTGATTGCATACACGACTCATGTACCATCATTTGCCGACACATGGGGTTGGGTTATGGCTTCGGACCAACCACTATCGATTTGCGCTAATGAAATGGACAGAAGAATCGAAGCAAGAATAGATGGGGAACTTCTATATCTAAATGGTGCTTGGTTCCATTCATCTACAACCATGAATAAAACTGTTTACCAATCGCTGCAAAATGAAACTCACGTGTACACGGAAGAAAGTGCTAGATTTATTCCTGGACATGGCATGGCTTTTCATCTCTAA 1020 0.4206 MGEAPEVFYINGFSKFGHEIETQQNHVNDQNHDSSWYEEIIDDDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALVLDGKMQSAETDEFVYHECLIHPPLLCHPNPKTVFIMGGGEGSAAREALKHRSMDRVIMCDIDKEVVNFCRKYLIVNKEAFSHKKLDLVINDAKAELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDQPLSICANEMDRRIEARIDGELLYLNGAWFHSSTTMNKTVYQSLQNETHVYTEESARFIPGHGMAFHL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0869 339 Gene3D Vaccinia Virus protein VP39 87 338 IPR029063 -
Gso14g0869 339 Coils Coil 160 180 - -
Gso14g0869 339 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 34 271 IPR030374 -
Gso14g0869 339 PANTHER BNAA02G04280D PROTEIN 1 337 - -
Gso14g0869 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 316 IPR029063 -
Gso14g0869 339 Hamap Polyamine aminopropyltransferase [speE]. 35 316 IPR001045 GO:0003824
Gso14g0869 339 Pfam Spermine/spermidine synthase domain 90 269 - -
Gso14g0869 339 Gene3D Spermidine synthase, tetramerisation domain 34 86 IPR037163 -
Gso14g0869 339 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 337 - -
Gso14g0869 339 CDD AdoMet_MTases 115 223 - -
Gso14g0869 339 Pfam Spermidine synthase tetramerisation domain 36 87 IPR035246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0869 Gso-Chr14 9976377 9981639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0869 K18787 - gmx:100784972 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0869 14 9976377 9981639 Gso14g0869 14 9976377 9981639 ECH
Gso14g0869 14 9976377 9981639 Gso17g1913 17 38041010 38046627 GST