Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1617 ATGAGTTTATCATTTTGTTCACTGATGACAGCAAAGCCTTGTTCCATGATCAATACTGGGAGCAATAGGAAACCATGTTGTGGTCGTAGAAGATTTGGTGTTATAATTAGGTCGGAAGTAAATGTGGCTCCCAAACAAAGAGGAATTCTCCGATTGTCAAAACAAGGAGTTCCTCTTGCTGTACAAGAGGTTGTTCACAGAAATATTTGCGCGGAATATGCCAAGACCTTTTATCTAGTTTGGTGCAGAAGGATGGATGGACTTGTTGATGATCCTAACGCGGTGTATATGAGCTCTGCTATTCTTGATAGGTGGGAAGATAGATTGCACGACATTTTTAATGGACAACCCTATGATATGCTTGATGCTGCTCTTACTGATATCGTCTCCAAGTTTCCCTTGGATATTAAGGGACATGATACAAAACATGAGAATGGATACGAGGAAAGCCCGATACAACAATTTTCAAGAGTTATATCTTTACTGCTACTATGTGGCGGGAACTGTGGGCTTAATGACTGTTCCGATAATGGGCATTGCCCAGGAGTCTGTCATCCCAATTCAAAGTGTATATGA 576 0.4097 MSLSFCSLMTAKPCSMINTGSNRKPCCGRRRFGVIIRSEVNVAPKQRGILRLSKQGVPLAVQEVVHRNICAEYAKTFYLVWCRRMDGLVDDPNAVYMSSAILDRWEDRLHDIFNGQPYDMLDAALTDIVSKFPLDIKGHDTKHENGYEESPIQQFSRVISLLLLCGGNCGLNDCSDNGHCPGVCHPNSKCI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1617 191 PANTHER PHYTOENE SYNTHASE, CHLOROPLASTIC 67 138 - -
Gso13g1617 191 Gene3D Farnesyl Diphosphate Synthase 59 160 IPR008949 -
Gso13g1617 191 SUPERFAMILY Terpenoid synthases 67 138 IPR008949 -
Gso13g1617 191 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 67 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1617 Gso-Chr13 31379021 31381656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1617 K02291 - gsj:114380959 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0006 18 105591 107796 Gso13g1617 13 31379021 31381656 GST