Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1417 ATGACAACCATGTCAACCTCATCCTCTTCCCAAAGCCTCAAAATTGGCATTGTTGGATTCGGCAACTTTGGCCAGTTTCTGGCCAAGACAATGATTAAACAAGGCCACACTCTCACAGCAACTTCTCGATCTGATTACTCTCAACTTTGTCTCCAAATGGGGATCCATTTTTTCAGGGATGTCAGCGCATTCCTCGCCGCAGACATAGATGTTATAGTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTAGGGTCAATGCCACTCACTTCCCTGAAGCGACCAACGCTCTTTGTTGATGTTCTTTCTGTGAAAGAGCACCCAAGAGAGCTTCTACTACGAGAGTTGCCAGAGGATTCAGACATACTCTGCACGCACCCAATGTTTGGTCCTCAGACTGCCAATAATGGATGGGCAGATCACACTTTCATGTATGACAAAGTTCGGATAAGAGACGAAGCTACTTGCTCTAGTTTCATCCAAATCTTTGCTACTGAGGGTTGCAAGATGGTACAGATGTCCTGTGAGGAACATGACAGAGCGGCTGCTAAGAGCCAATTTATCACACACACAATTGGCAGGACATTGGGAGAAATGGATATTCAATCCACACCTATTGACACTAAGGGCTTTGAGACACTTGTTAAATTGAAGGAGACTATGATGAGAAATAGTTTTGATTTGTACAGTGGATTATTCGTGTATAACAGATTCGCCAGACAAGAGTTGGAAAACCTTGAACATGCCTTTTACAAAGTCAAAGAAACGCTGATGATACAAAGGTCGAATGGGGAGCAGGGTCATAAAAGAACCGAAAGTTGA 825 0.4376 MTTMSTSSSSQSLKIGIVGFGNFGQFLAKTMIKQGHTLTATSRSDYSQLCLQMGIHFFRDVSAFLAADIDVIVLCTSILSLSEVVGSMPLTSLKRPTLFVDVLSVKEHPRELLLRELPEDSDILCTHPMFGPQTANNGWADHTFMYDKVRIRDEATCSSFIQIFATEGCKMVQMSCEEHDRAAAKSQFITHTIGRTLGEMDIQSTPIDTKGFETLVKLKETMMRNSFDLYSGLFVYNRFARQELENLEHAFYKVKETLMIQRSNGEQGHKRTES* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1417 274 Pfam Prephenate dehydrogenase, nucleotide-binding domain 28 134 IPR046826 -
Gso13g1417 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 174 IPR036291 -
Gso13g1417 274 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 1 271 - -
Gso13g1417 274 Gene3D - 1 180 - -
Gso13g1417 274 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 13 274 IPR003099 GO:0004665|GO:0006571|GO:0008977
Gso13g1417 274 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 175 259 IPR008927 -
Gso13g1417 274 PANTHER AROGENATE DEHYDROGENASE-RELATED 1 271 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1417 Gso-Chr13 29684514 29686917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1417 K15227 - gmx:100810896 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0201 18 1730568 1733152 Gso13g1417 13 29684514 29686917 GST