Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1416 ATGAAGCCCCACACTACGGCTTCTTCTTTCGCCACTAGTCTCCCGCACGTGCCTTGCTTCCGCGGCACCACTGCCGCACGTGCCACTCCATCGGAGCCTCATCATGACTCCGCCGGAGGCCTCGAATTCCGACGCGTCTCGACATCCAAACGCCGCCTCATCAACCTCTCCGTCCGCCACGCTAGTCGCGTCACCGCGGCGTCGAATCCCGGCGGTTCCGACGGCGATGGTGACACTCGAGCTCGGAGCTGCCGGCGCGGCGTGCTGATGACGCCGTTCTTAGTCGCCGGCGCGTCAATCCTGCTCTCGGCGGCGACGGCGACGGCGAGAGCGGATGAGAAGGCGGCGGAATCGGCTCCGGCTCCGGCGGCGCCGGAGGAGCCGCCGAAGAAGAAAGAAGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGACGGTGATAGGAGAACCGTTGGCGATAGGGAAAGAGAAAGGAAAAATATGGGAGAAGTTGATGAATGCTCGAGTGGTATATTTAGGTGAAGCAGAGCAAGTTCCGGTTCGAGACGATAGGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAGGCGCTGTTTGGTGAAGGAAAAACGATTGTCTCTGGCTCTTGAAGTTTTCCCCGCTAATCTTCAGGAACCGCTCAATCAGTATATGGATAAGAAGATAGACGGAGACACCTTGAAGTCTTACACGCTACATTGGCCGCCTCAAAGATGGCAAGAGTATGAACCTATTCTGAGCTACTGTCACGAAAATGGAATTCGTCTTGTTGCTTGTGGTACACCACTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGATGAACGTAAACTATATGCACCTCCAGCTGGTTCAGGCTTCATATCTGGCTTTACGTCTATCTCACGCAGATCTTCAGTTGATAGTACTCAAAATTTGTCTATTCCTTTTGGTCCAAGCTCATACCTTTCTGCACAAGCTAGAGTAGTTGATGAGTATTCTATGTCCCAGATTATCTTGCAAAATGTGCTTGATGGAGGGGTCACTGGTATGTTAATAGTTGTGACTGGTGCAAGCCATGTTACATATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGCAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCAGAGGAGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCAGAACTCACTCACCGTTTCCAGGGATTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCTATATCGATAACAACTACATTATTGGCACAGTATGAAAAGAGGAAAGAAAACTTTTTCCAAGAGATTGACTATGTTATTACGGACACCGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAAGCACCCGACAACATTGGTTCTCTAATGGGACTTCTTGGCTCCATCCCGGACAATGCATTTCAAAAGAATCCGGCAGGGATAAACTGGAATCTCAATCATAGGATTGCATCAGTTGTATTTGGTGGTTTAAAACTTGCTAGTGTGGGATTTATTTCAAGCATAGGAGCTGTCGCTTCATCAAATTCTCTATATGCAATTCGTAAAGTCTTTAATCCAGCAGTTGTCACTGAACAACGGATTATGAGGTCACCAATACTCAAAACTGCAGTTATATATGCATGCTTTCTTGGAATATCAGCAAATCTCCGTTATCAGATAATTGCTGGGGTAGTGGAGCATCGGCTTTCTGAACAGTTTGCTTCTCAAACATTCTTTGTAAATATGCTTTCTTTTGTAGCACGGACAGTAAATTCGTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTACAAGTTAGAAAGACAGAGTCACCAACATCAGATACTCCGAATCCTGCTGCAATTTTGTGCAATGAAACAGAAGAAGCCAGCATTGATGAGATAGAAAAATAA 2247 0.4651 MKPHTTASSFATSLPHVPCFRGTTAARATPSEPHHDSAGGLEFRRVSTSKRRLINLSVRHASRVTAASNPGGSDGDGDTRARSCRRGVLMTPFLVAGASILLSAATATARADEKAAESAPAPAAPEEPPKKKEEEEVITSRIYDATVIGEPLAIGKEKGKIWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCLVKEKRLSLALEVFPANLQEPLNQYMDKKIDGDTLKSYTLHWPPQRWQEYEPILSYCHENGIRLVACGTPLKILRTVQAEGIRGLTKDERKLYAPPAGSGFISGFTSISRRSSVDSTQNLSIPFGPSSYLSAQARVVDEYSMSQIILQNVLDGGVTGMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQAVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNPAGINWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYAIRKVFNPAVVTEQRIMRSPILKTAVIYACFLGISANLRYQIIAGVVEHRLSEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPTSDTPNPAAILCNETEEASIDEIEK* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1416 748 SUPERFAMILY EreA/ChaN-like 160 416 - -
Gso13g1416 748 Gene3D - 151 315 - -
Gso13g1416 748 Coils Coil 736 748 - -
Gso13g1416 748 MobiDBLite consensus disorder prediction 61 80 - -
Gso13g1416 748 Pfam Haem-binding uptake, Tiki superfamily, ChaN 162 380 IPR007314 -
Gso13g1416 748 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 4 747 - -
Gso13g1416 748 Pfam Protein RETICULATA-related 487 671 IPR021825 -
Gso13g1416 748 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 4 747 - -
Gso13g1416 748 MobiDBLite consensus disorder prediction 24 44 - -
Gso13g1416 748 MobiDBLite consensus disorder prediction 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1416 Gso-Chr13 29677682 29684138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1416 - - gmx:100810366 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0202 18 1733211 1740541 Gso13g1416 13 29677682 29684138 GST