Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1816 ATGGAGGAGAAAAAAGAGCTAAAAAAGTCTAAGGTTATCAAAATAGACTCTCAAAAATCATGGGAACACCACATCTCTCATGCCACCAATAAAAAGTACCCAGTTGTGGTTCATTTCTCTGCTTTCTGGTGTGTGCCTTCTATAGTTATGAATCCTTTCTTTCAAGAATTAGCCTCCACCTATGAAGATGTTTTGTTTCTGACGTTGGATGTGGATGAGGTTAAGGAAATTGCTTCCAAGATGGAAATCAAAGCCATGCCCACCTTTCTGTTACTGAGTGGAGGGACTCCCATGGACAAAATTGTGGGTGCAAATCCTGATGAAATAAGGAAAAGGATTGATCATTTTGTTAACTCAACTCATTCCTACAAATCTGTGTAA 381 0.3885 MEEKKELKKSKVIKIDSQKSWEHHISHATNKKYPVVVHFSAFWCVPSIVMNPFFQELASTYEDVLFLTLDVDEVKEIASKMEIKAMPTFLLLSGGTPMDKIVGANPDEIRKRIDHFVNSTHSYKSV* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1816 126 CDD TRX_family 34 114 - -
Gso12g1816 126 PANTHER THIOREDOXIN 1 121 - -
Gso12g1816 126 Gene3D Glutaredoxin 1 124 - -
Gso12g1816 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Gso12g1816 126 PANTHER THIOREDOXIN 1 121 - -
Gso12g1816 126 Pfam Thioredoxin 16 114 IPR013766 -
Gso12g1816 126 SUPERFAMILY Thioredoxin-like 6 118 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1816 Gso-Chr12 41869828 41871419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1816 K03671 - gmx:100813627 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1816 12 41869828 41871419 Gso11g3047 11 46324745 46326435 GST
Gso12g1816 12 41869828 41871419 Gso12g1131 12 16038365 16040225 PCT
Gso12g1816 12 41869828 41871419 Gso6g2213 6 42778724 42780481 PCT
Gso12g1131 12 16038365 16040225 Gso12g1816 12 41869828 41871419 PCT
Gso6g2213 6 42778724 42780481 Gso12g1816 12 41869828 41871419 PCT