Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3047 ATGGAGGAGAAAGAAGAGCTCAAAAAGTCTAAGGTTATTAAAATAGACTCTCAAAAATCATGGGAACACCACATCTCTTATGCTACCAATCAAAAGTACCCTATTGTAGTTCATTTCTCTGCTTTCTGGTGTGTCCCTTCTTTAGTTATGAATCCTTTCTTTCAAGAATTGGCCTCCACTTATGAAGATGTTTTGTTTCTGACGTTGGATGTGGATGAGGTTAAGGAAATTGCCTCCAAGATGGAAATCAAAGCCATGCCCACCTTTCTGTTGCTGAGTGGAGGGACTCCTGTGGACAAAATTGTGGGTGCAAATCCTGATGAAATTAGGAAAAGGATTGACCATTTTGTTCACTCAACTCGTTCCTAG 369 0.4011 MEEKEELKKSKVIKIDSQKSWEHHISYATNQKYPIVVHFSAFWCVPSLVMNPFFQELASTYEDVLFLTLDVDEVKEIASKMEIKAMPTFLLLSGGTPVDKIVGANPDEIRKRIDHFVHSTRS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3047 122 CDD TRX_family 34 114 - -
Gso11g3047 122 PANTHER THIOREDOXIN 1 121 - -
Gso11g3047 122 PANTHER THIOREDOXIN 1 121 - -
Gso11g3047 122 SUPERFAMILY Thioredoxin-like 7 117 IPR036249 -
Gso11g3047 122 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Gso11g3047 122 Pfam Thioredoxin 16 114 IPR013766 -
Gso11g3047 122 Gene3D Glutaredoxin 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3047 Gso-Chr11 46324745 46326435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3047 K03671 - gmx:100499858 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1816 12 41869828 41871419 Gso11g3047 11 46324745 46326435 GST
Gso15g0541 15 4827537 4830290 Gso11g3047 11 46324745 46326435 GST
Gso11g3047 11 46324745 46326435 Gso12g1131 12 16038365 16040225 PCT
Gso11g3047 11 46324745 46326435 Gso6g2213 6 42778724 42780481 PCT
Gso12g1131 12 16038365 16040225 Gso11g3047 11 46324745 46326435 PCT
Gso6g2213 6 42778724 42780481 Gso11g3047 11 46324745 46326435 PCT