Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1580 ATGAGCACCAAGGAGTGCTGCCACCACGACGAGGAGCGGCGTCAGCTCCCCCGCCGCGTATTCGCCGCGATCCTCGGCTTCATCCTCCTCATCCTCCTGGTGATCTTCCTCATCTGGATCATCCTCCGCCCCACCAAACCCCGCTTCATCCTCCAAGACGCCACCGTCTACGCCTTCAACCTCTCCTCCACCGGCGACACCCCTTCCCCCATTACCCCAACCCCCAACACCCTCACCCTCACCATGCAGGTCACCCTCGCCGCCTTCAACCCCAACCACCGCATCGGAGTTTACTACACCAAACTCGACGCCTACGCCGCCTACCGCGGCCAGCAGGTCTCCGTCGCCACCTCCCTCCCCGCCACCTACCAGGGCCACCGCGACACCTCCGTCTGGTCCCCCTACCTCTACGCCACCGCCGTCCCCGTCTCCCCCTTCACGCTCCAGATCCTCCAGCAGGACAAAACCTCCGGAGGAATTCTGGTCAACGTAAAAGTCAACGGAAGAGTCAAGTGGAAGGTCGGAACTTGGGTTTCCGGAATTTACCATATTAATGTCAACTGTCCGGCGTACCTCAGGCTCGCCGGCGACCGGGACGACGCCATCGGATTTGCCGGTCCGGCCGTGAAGTTTCAGCTCTTCCAAACATGCATTGTTGATGTCTAG 666 0.6126 MSTKECCHHDEERRQLPRRVFAAILGFILLILLVIFLIWIILRPTKPRFILQDATVYAFNLSSTGDTPSPITPTPNTLTLTMQVTLAAFNPNHRIGVYYTKLDAYAAYRGQQVSVATSLPATYQGHRDTSVWSPYLYATAVPVSPFTLQILQQDKTSGGILVNVKVNGRVKWKVGTWVSGIYHINVNCPAYLRLAGDRDDAIGFAGPAVKFQLFQTCIVDV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1580 221 PANTHER OS05G0367900 PROTEIN 5 221 IPR044839 GO:0098542
Gso12g1580 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 5 221 - -
Gso12g1580 221 Pfam Late embryogenesis abundant protein 85 188 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1580 Gso-Chr12 39285896 39287045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1580 2 188 EF-hand Containing Proteins AT5G21130 22.872 4.70e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1580 - - gmx:100818413 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1580 12 39285896 39287045 Gso11g3269 11 48516909 48517780 GST
Gso12g1580 12 39285896 39287045 Gso12g0764 12 7690491 7691906 PCT
Gso12g1580 12 39285896 39287045 Gso11g1348 11 15197155 15198171 PCT
Gso12g0764 12 7690491 7691906 Gso12g1580 12 39285896 39287045 PCT
Gso11g1348 11 15197155 15198171 Gso12g1580 12 39285896 39287045 PCT