Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1348 ATGTCCGTCAAAGAGTGCGGCCACCACTCCTCCCAACGCCGCAACCTCCTCCGCCTCATCCTCGGCGCCACCTCCGCCTTCGTCCTCCTCATCCTCCTCACCATCTTCCTCATCTGGGTCATCCTCCGCCCCACAAAGCCCCGCTTCACTCTCCAAGATGCCACCCTCTACGCCTTCAACCTCTCCACTCCCACACCCAACACCCTCACCCTCACCATGCAGGTCACCCTCTCCTCCCACAACCCCAACGCGCGCGTCGGCGTCTACTACCACGCGCTCCACGTCTACGCCTCCTACCGGAGCCAGCAGATCTCCCTCGCCACCGCGCTCCCCGACACCTACCAGGGCCACCGCGACTTCGCCGTCTGGTCGCCGTTTCTATTCGGTAACGTCGTCCCCGTCTCGCCGTTTGTGCTCAGCTCACTGCAGCAGGACCAGAGCGCTGCCGGCGCCGTTTTGGTCAACGTTAAGGTCAACGGGAGGGTCAAGTGGAAGGTCGGGTCTTGGGTCTCTGGGAGGTACCATATCTATGTGAACTGTCCCGCGTATATTAGCTTCGCCGGAGATCGGAGCATTGCCGCCGGAGGACTCGTGGCTTCGCCGGTGAAGTTTCGCCTCTTGCAGAGTTGCAATGTTGATGTGTAG 645 0.6171 MSVKECGHHSSQRRNLLRLILGATSAFVLLILLTIFLIWVILRPTKPRFTLQDATLYAFNLSTPTPNTLTLTMQVTLSSHNPNARVGVYYHALHVYASYRSQQISLATALPDTYQGHRDFAVWSPFLFGNVVPVSPFVLSSLQQDQSAAGAVLVNVKVNGRVKWKVGSWVSGRYHIYVNCPAYISFAGDRSIAAGGLVASPVKFRLLQSCNVDV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1348 214 PANTHER OS05G0367900 PROTEIN 5 214 IPR044839 GO:0098542
Gso11g1348 214 Pfam Late embryogenesis abundant protein 76 180 IPR004864 -
Gso11g1348 214 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1348 Gso-Chr11 15197155 15198171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1348 - - gmx:100819285 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1348 11 15197155 15198171 Gso11g1348 11 15197155 15198171 ECH
Gso12g0764 12 7690491 7691906 Gso11g1348 11 15197155 15198171 GST
Gso12g1580 12 39285896 39287045 Gso11g1348 11 15197155 15198171 PCT
Gso11g3269 11 48516909 48517780 Gso11g1348 11 15197155 15198171 PCT
Gso11g1348 11 15197155 15198171 Gso12g1580 12 39285896 39287045 PCT
Gso11g1348 11 15197155 15198171 Gso11g3269 11 48516909 48517780 PCT