Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1572 ATGGACAAGACTTCATCCTCGTCGGACATCACCACCGTCCACCCCGACATCTTTCAATCCCACATCCTTAATCGCCTCGACGGCCCCACCCTCGCTTCCGCCGCTTCCGCCACCTCTCACCTCCGCGGCCTCTGCACCGAACACCACCTCTGGCGTAACATCTGCGCCGCCACGTGGCCTTCTCTCAACGATCCCCTCGCCGCGGCCACCATCGCCACCTTCCCCGCCACCCACCGCTCCATCTTCTCCGACTCCTTCCCCTCCCTCCACCACTCCCCTCCCAATCCCATCCCAACACAACCACCGACACCTCCGCCGCCGGAGCTCATCTCCGCCGTGGACATATACTACAAGGGCAAACCCGTCTTTTCCCGCGTCATCCGAACCGAAACCCACAAGGGGTGGTTCCTCTGCTCCCCCCTCTGGGTGGACCTCCTCGACCCCACCGAGGTGGTCCCCACTCCCCTGAAATTCGCCCAAACCAACGACGAAATCGAATTGCTCAACCACCTCGTGGAGAATCTCGCCCTCAGCTGGATCATCATCGACCCGACCCGAAAACGCGCCGCGAACCTCTCCAGCCGCCGCCCGGTTTCGGCGCGGCGCCACTGGCTCACGGCGGAGCTCGAGGTGCTCTACGCCGTGCCCATGGAGACAGTCCAGTGCGTCGTAAAGGTCACGTGCTGCGGGAAGGTCGGCGGCGCGATGCACGTGCGCGAGGTGAGCCTCACCATGGAGGACACCGAGGGGAGGCACGTGATGGGCAGGGACGGCGTCGTAATTTTACAAGACGCGATGGAGAATGGGAAGAGAGAAAAACTTGACGCGGAGAAAGCGAAAGAGAGGTTCGAGAAATTCTCCATTGTGAAGAGAGAGATTAGAGAGAGGAAGATGAGGAGAGACAGGGCAATGGACATGGTTGCCATGTTGATCGCTTTTGCTGTTTTTGCTTTGCTCTTCTGCTTCATGGCTTTTGGTGTTTGA 984 0.6016 MDKTSSSSDITTVHPDIFQSHILNRLDGPTLASAASATSHLRGLCTEHHLWRNICAATWPSLNDPLAAATIATFPATHRSIFSDSFPSLHHSPPNPIPTQPPTPPPPELISAVDIYYKGKPVFSRVIRTETHKGWFLCSPLWVDLLDPTEVVPTPLKFAQTNDEIELLNHLVENLALSWIIIDPTRKRAANLSSRRPVSARRHWLTAELEVLYAVPMETVQCVVKVTCCGKVGGAMHVREVSLTMEDTEGRHVMGRDGVVILQDAMENGKREKLDAEKAKERFEKFSIVKREIRERKMRRDRAMDMVAMLIAFAVFALLFCFMAFGV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1572 327 Coils Coil 262 282 - -
Gso12g1572 327 PANTHER F-BOX PROTEIN-RELATED 5 321 IPR045283 -
Gso12g1572 327 SUPERFAMILY F-box domain 19 62 IPR036047 GO:0005515
Gso12g1572 327 PANTHER F-BOX PLANT-LIKE PROTEIN 5 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1572 Gso-Chr12 39185789 39187050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1572 - - gmx:100781337 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1572 12 39185789 39187050 Gso11g3275 11 48608979 48610376 GST
Gso12g1572 12 39185789 39187050 Gso11g1362 11 15494717 15496922 PCT
Gso11g1362 11 15494717 15496922 Gso12g1572 12 39185789 39187050 PCT