Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3275 ATGACACCACCCATGGACAATACTTCATTCTCGTCCGACATCACAACCGTCCACCCCGACATCTTTCAATCCCACATCCTTAATCGCCTCGACGGTCCTACTCTCGCCTCCGCCGCTTCCTCCACCTCCCATCTCCGCCGCCTCTGCACAGAACACCACCTCTGGCGTAACATTTCCGCTGCCACGTGGCCTTCTCTCAACGACCCCCTCGCCGCGGCCATTATCACCACCTTCCCCGCCCGCCACCGTTCCATCTTCTCCGACTCCTTCCCCTCCCTCCACCATTCCCCTCCCAATCTCAACCCAACACCACCACCCCCTCCGCCGCCGGAGCTCATCTCTGCCGTGGACCTCTACTACAAGGGTAAACCCGTCTTTTCCCGCGTCATCAAAACCGAAACCCACAAGGGCTGGTTCCTCTGCTCCCCTCTCTGGGTGGACCTCCTCGACCGCAACGAGGTGGTCCCCACTCCCCTCAAATTCGCGCAAACCAACGACGAAAACGAATTGCTCAACCACCTCGATGAGAATCTCACCCTCAGCTGGATCATCATCGACCCGACCCGAAAACGCGCGGCGAACCTCTCCAGCCGCCGCCCCGTCGCCGTGCGGCGCCACTGGCTCACGGCGGAGCTCCAGGTTCTCTACGCCGTGCCCATGGAAACCGTCCAGTGCGTCGTAAAGGTCACGTGCTGCGGGAAGGCCGGTGGCGCGATGCACGTGCGCGAGGTGAGTCTCACCATGGAGGACACCGAGGGGAGGCACGTGATGGGAAAGGACAGTGTTGTAATTTTACAAGACGCGATGGAGAATGGAAAGAGAAAAAAACTTGACGAAGTAGAAGCAAAAGAGAGGTTCGAGAAATTCTCCATTGTGAAGAGAGAGATTAGAGAGAGGAAGATGAGGAGAGACAAGGCAACGGACATGGTTGCCATGTTGGTAGCTTTTGCTGTTTTTGCTCTGCTCTTCTGGTTTATGGCTTTTGCTGTTTGA 993 0.573 MTPPMDNTSFSSDITTVHPDIFQSHILNRLDGPTLASAASSTSHLRRLCTEHHLWRNISAATWPSLNDPLAAAIITTFPARHRSIFSDSFPSLHHSPPNLNPTPPPPPPPELISAVDLYYKGKPVFSRVIKTETHKGWFLCSPLWVDLLDRNEVVPTPLKFAQTNDENELLNHLDENLTLSWIIIDPTRKRAANLSSRRPVAVRRHWLTAELQVLYAVPMETVQCVVKVTCCGKAGGAMHVREVSLTMEDTEGRHVMGKDSVVILQDAMENGKRKKLDEVEAKERFEKFSIVKREIRERKMRRDKATDMVAMLVAFAVFALLFWFMAFAV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3275 330 PANTHER F-BOX PLANT-LIKE PROTEIN 9 324 - -
Gso11g3275 330 PANTHER F-BOX PROTEIN-RELATED 9 324 IPR045283 -
Gso11g3275 330 SUPERFAMILY F-box domain 23 70 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3275 Gso-Chr11 48608979 48610376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3275 - - gmx:100794825 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1572 12 39185789 39187050 Gso11g3275 11 48608979 48610376 GST
Gso11g3275 11 48608979 48610376 Gso11g1362 11 15494717 15496922 PCT
Gso11g1362 11 15494717 15496922 Gso11g3275 11 48608979 48610376 PCT