Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1533 ATGGGGGAATTCAAGCACTTTGTAATTGTTAAGTTCAAGGAAGGTGTGGCCGTTGACGAGCTCACAAAAGGGATGGAAAAGTTGGTCACGGAGATTGGTGCTGTCAAGTCCTTTGAATGGGGACAAGACATTGAAAGCCTAGATGTGTTGAGACAAGGTTTCACTCATGCATTCTTGATGACATTCAACAAGAAAGAAGACTTTGTTGCATTTCAGAGCCACCCAAATCATGTCGAGTTCTCGACAAAGTTTTCGGCAGCTATTGAGAATATTGTGCTACTGGATTTCCCATCTACTCTTGTGAAGGCCCCAGCATGA 318 0.4371 MGEFKHFVIVKFKEGVAVDELTKGMEKLVTEIGAVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFVAFQSHPNHVEFSTKFSAAIENIVLLDFPSTLVKAPA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1533 105 SMART Dabb_2 4 98 IPR013097 -
Gso12g1533 105 Gene3D - 2 105 - -
Gso12g1533 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Gso12g1533 105 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Gso12g1533 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Gso12g1533 105 PANTHER - 1 104 IPR044662 -
Gso12g1533 105 PANTHER EXPRESSED PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1533 Gso-Chr12 38780290 38781576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1533 - - gmx:100500080 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1533 12 38780290 38781576 Gso11g3313 11 48901892 48903002 GST
Gso12g1533 12 38780290 38781576 Gso12g0700 12 6996768 6998023 PCT
Gso12g1533 12 38780290 38781576 Gso11g1417 11 16322819 16324112 PCT
Gso12g0700 12 6996768 6998023 Gso12g1533 12 38780290 38781576 PCT
Gso11g1417 11 16322819 16324112 Gso12g1533 12 38780290 38781576 PCT