Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1417 ATGGGGACTTTCAATCACTATGTGATTGTTAAGTTCAAAGATGGTGTGGCAGTTGATGATCTCATTCAAGGGTTGGAGAAGATGGTCTTTGGGATTGACCATGTCAAGTCCTTTGAATGGGGAAAGGACATTGAAAGTCATGATATGCTAAGACAAGGTTTCACTCATGCTTTCTTGATGACATTCAATGGGAAAGAGGAGTTCAACGCATTTCAGACTCACCCAAATCATCTTGAGTTCTCGGGAGTGTTTTCACCTGCTATTGAGAAGATTGTGGTGCTGGATTTCCCATCTAACCTCGTCAAAGCACCAGCATGA 318 0.4245 MGTFNHYVIVKFKDGVAVDDLIQGLEKMVFGIDHVKSFEWGKDIESHDMLRQGFTHAFLMTFNGKEEFNAFQTHPNHLEFSGVFSPAIEKIVVLDFPSNLVKAPA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1417 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Gso11g1417 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Gso11g1417 105 PANTHER EXPRESSED PROTEIN 1 104 - -
Gso11g1417 105 SMART Dabb_2 4 98 IPR013097 -
Gso11g1417 105 PANTHER - 1 104 IPR044662 -
Gso11g1417 105 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Gso11g1417 105 Gene3D - 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1417 Gso-Chr11 16322819 16324112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1417 - - gmx:100306003 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1417 11 16322819 16324112 Gso11g1417 11 16322819 16324112 ECH
Gso12g0700 12 6996768 6998023 Gso11g1417 11 16322819 16324112 GST
Gso12g1533 12 38780290 38781576 Gso11g1417 11 16322819 16324112 PCT
Gso11g3313 11 48901892 48903002 Gso11g1417 11 16322819 16324112 PCT
Gso11g1417 11 16322819 16324112 Gso12g1533 12 38780290 38781576 PCT
Gso11g1417 11 16322819 16324112 Gso11g3313 11 48901892 48903002 PCT