Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1478 ATGGAGAAGCTTGCTACCTTGGTTTTGATTTGCTGTTTATTTACGGCACTTCTATTCCTCTCTTTACCAGTGATGTCTCAAGAAGTTGAAGATGAGAGCGATTTTAGTCACGACGAAAAGAGCGAGAATGGACCATCTCGTTGGGGAGACATACACCCCAAATGGAGTTTGTGCAACAATGGATCCATGCAGTCGCCTATTGATCTATTGAATGAGAGGGTTCAAATAGGATCCCATCTAGGGAGGCTTCAGATGAACTACCAACCCTCTAATGCCACTATCAAGAATAGGGGCCATGATATTAAGCTAGAATGGGTTGCTGGCTCAGGCTATCTTCAAACTAATGAAACTAAGTACGTACTCAAACAATGTCATTGGCATTCTCCCTCTGAGCACACAATAGATATGGCAAAAGAGTTACACATGCTGCACGAAACTTCATCTGGACAATCTGCTGTGATTGGAATACTGTACAAAATTGGAAGACCAGATTCTTTCTTGTCATCGTTAACGGATCATTTAAGAGCCATTTCTGATACCACGGGAGAAGAAAGAGTGGTGGGTGTAGTTGACCCTAGGCAAATCAAAATATTCTACAAGCAGTATTACAGATATATTGGTTCACTGACAATTCCTCCTTGCACCGAGAATGTTTCTTGGACCATCATACAATCCGTTTCAAAGGAACAAGTTAGATTGCTTCGAGTCGCTGTTCATGATGAATCAGATACTAACGCAAGGCCACTGCAACTAATAAATAACCGTTAA 768 0.4154 MEKLATLVLICCLFTALLFLSLPVMSQEVEDESDFSHDEKSENGPSRWGDIHPKWSLCNNGSMQSPIDLLNERVQIGSHLGRLQMNYQPSNATIKNRGHDIKLEWVAGSGYLQTNETKYVLKQCHWHSPSEHTIDMAKELHMLHETSSGQSAVIGILYKIGRPDSFLSSLTDHLRAISDTTGEERVVGVVDPRQIKIFYKQYYRYIGSLTIPPCTENVSWTIIQSVSKEQVRLLRVAVHDESDTNARPLQLINNR* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1478 255 CDD alpha_CA_prokaryotic_like 44 255 IPR041891 -
Gso12g1478 255 SUPERFAMILY Carbonic anhydrase 36 255 IPR036398 -
Gso12g1478 255 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 22 254 - -
Gso12g1478 255 Gene3D Alpha carbonic anhydrase 31 255 IPR036398 -
Gso12g1478 255 ProSiteProfiles Alpha-carbonic anhydrases profile. 33 255 IPR001148 -
Gso12g1478 255 SMART Carb_anhydrase_2a 37 255 IPR001148 -
Gso12g1478 255 Pfam Eukaryotic-type carbonic anhydrase 43 255 IPR001148 -
Gso12g1478 255 PANTHER CARBONIC ANHYDRASE 22 254 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1478 Gso-Chr12 37815488 37817943 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1478 K01674 - gmx:100810249 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1478 12 37815488 37817943 Gso11g3365 11 49501902 49504451 GST
Gso11g1491 11 17365954 17368783 Gso12g1478 12 37815488 37817943 PCT