Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1491 ATGGAAAAGCTTGCTAAGCAGGTTTTGTTTTGCAGTTTATTAACTGCACTTGTTTTGCTACCATTCCCGGTAATAATGTCTCATTTAGTTGAGGACGAGAGCGAGTTTAATTATGATGTTAAGAGTAAGAGAGGACCATATAACTGGGGAAACATTAAACCCGAATGGAGTATATGCAAAAATGGATCCATGCAGTCACCGATTAATCTGTTGAATAAGAGGGTTCAAATAGCACCCCATTTGGGAAAACTTCATATCAACTACCAACCATCCAATGCAACTCTTAGGAATAGGGGTCATAATATAATGCTGGAATGGCTTGCTGGCACAAGCTATCTACAAATTAATGAAACTCAGTATGTACTTAAGCAATTCCATTGGCATTCTCCCTCTGAGCACACCATAGATGGCAGAAGGTTTGATCTGGAGTTACACATGGTGCATGAAGCTTCATCCGGAGAAATTGCAGTGATTGGAATGTTGTATAAGGCTGGAAGACCAGACCCTTTATTGTCATTGTTAGGGAATCACATAAAGGCCATTTCTGATTGTACGGGAGCAGAAATAGAATTGGGTGTACTGGATCCTTGGCTGGTTAGCATATGCAGAAGCAGAACACAGTATTACAGATATAGTGGTTCTCTGACTACTCCTCCGTGCACTGAGAATGTTGCTTGGACCGTGCTTACAGAGGTGAGATATGTTTCAAGGGAGCAAATCAGACTGCTTAGAGTTGCCGTTCATGATGATTCAAATGCAAGACCATTGCAACCAATAAACAATCGCTTAGTGAAACTCTATATACCATTGCAGGATTCAAATCGCTTAGTGCAACGTTAG 840 0.4083 MEKLAKQVLFCSLLTALVLLPFPVIMSHLVEDESEFNYDVKSKRGPYNWGNIKPEWSICKNGSMQSPINLLNKRVQIAPHLGKLHINYQPSNATLRNRGHNIMLEWLAGTSYLQINETQYVLKQFHWHSPSEHTIDGRRFDLELHMVHEASSGEIAVIGMLYKAGRPDPLLSLLGNHIKAISDCTGAEIELGVLDPWLVSICRSRTQYYRYSGSLTTPPCTENVAWTVLTEVRYVSREQIRLLRVAVHDDSNARPLQPINNRLVKLYIPLQDSNRLVQR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1491 279 Gene3D Alpha carbonic anhydrase 32 273 IPR036398 -
Gso11g1491 279 Pfam Eukaryotic-type carbonic anhydrase 45 265 IPR001148 -
Gso11g1491 279 PANTHER CARBONIC ANHYDRASE 12 271 IPR023561 GO:0004089|GO:0008270
Gso11g1491 279 SUPERFAMILY Carbonic anhydrase 35 264 IPR036398 -
Gso11g1491 279 ProSitePatterns Alpha-carbonic anhydrases signature. 131 147 IPR018338 GO:0004089|GO:0008270
Gso11g1491 279 CDD alpha_CA_prokaryotic_like 45 266 IPR041891 -
Gso11g1491 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 34 268 IPR001148 -
Gso11g1491 279 SMART Carb_anhydrase_2a 38 268 IPR001148 -
Gso11g1491 279 PANTHER ALPHA CARBONIC ANHYDRASE 7-LIKE 12 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1491 Gso-Chr11 17365954 17368783 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1491 K01674 - gmx:100777574 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1491 11 17365954 17368783 Gso11g1491 11 17365954 17368783 ECH
Gso12g1477 12 37793511 37797823 Gso11g1491 11 17365954 17368783 PCT
Gso11g1491 11 17365954 17368783 Gso12g1478 12 37815488 37817943 PCT
Gso11g1491 11 17365954 17368783 Gso11g3365 11 49501902 49504451 PCT