Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1465 ATGTTTTGGAAGCTCGCATCCCTTTCTGCTTCCTCCCCCGTGGAGACAATATTAGACAAGGAGAATTTCACTTTGGAAGAGCTTCTGGACGAAGAGGAAGTGATCCAAGAATGCAAGGCCTTAAACAGTCGTCTTATCAACTTTCTGAGAGATCAAGCCCAGGTTGAGCAATTGTTACGATACATTATTGAAGAACCACCAGAAGATGCTGAAAATAAACGGGCCTTCAAGTTTCCATTCATTGCCTGCGAGATATTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTTGATGAGGAAGAGCTGATGAACTTATTATTCTCTTTTTTGGAACCTAATCGCTCACATAGTACCTTGTTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTGCCACTTATGAAATATGTTCAAGCCCATCAGAATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTGGTAGGCGCTGATGACCATATGTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTTGAGATGATTGTTCATAAATTGAGTCCATCTAGTCCTCCTGAAGTTCATGCCAACGCGGCTGAAACATTGTGCACAATAACTCGAAATCCCTCATCGACTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCCAAAATTTTGGATCATGCACTGGAAGATTCACAATCAAAGTCTAGCCTTGTGAACTCACTTTCAGTGTGTGTTTCTTTATTGGATCCCAAAAGATCTGCTATATCATCTCCCCTTTTTCATTCATTTCGAAGTCAACATATGTATGAGCCACCCATTCCTGTAAACCCAGACACTATTGGTGCTGCGCTACCTAAATTAAGCGAATTGCTTATGCTTTTGAATGTATCATCTGATGAAAAAGTATTGCCTACAACATATGGAGAATTGAGACCTCCACTCGGGAAGCATCGATTAAAGATTGTTGAGTTCATTGCTGTCCTTCTAAAAACTGGAAATGAAGTGGCAGAAAAAGAAATGGTCAATTCAGGAACCATTCAACGAGTCATTGACCTCTTCTTTGAGTATCCATATAATAACTCCTTACACCATCATGTAGAAAGTATCATATTATCTTGTTTGGAGAGCAAAACTAATGCCATTGTTGAACATCTTCTTCAAGAGTGTAATTTAATTGGAAGATTTCTCCAAGCAGACAAACGTTCTACTCTCTCTGCTGACATAAATATGCCAACAGTACCTGCTGCTGGAAAACAAGTGCCACGGGCAGGAAACATTGGGCATATTACTCGAATTGTTAACAAACTTGTTCACCTGGCTCATAATCGAAACCTCATACTGACATGTCTTCAGGAAAATAGTGAGTGGAATGAATGGCAAGCTTCAGTTCTTCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTACAAGATAGGATGAGGGATAGTGATGATGATGAACTTCATGACAGAGACTATGATGTTGCAGCTCTAGCAAATAATTTGAACCAGGCTTTTAGATATAAAATTTATGGGAATGAGGATAACGAGGAGGAACGTGGCAACCTTGATCGAGATGATGAGGATGTCTACTTTGATAATGACTCTGCACAAGTAGTCATATCATCCCTCAGACTCAGTGACGATCAAGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGAATTCCAAGATGACAGAATTGGTGATGCAACTGGGGGAACAACATCATCGGAGATGATGGATGAGATAAACTTGAATGGTGCTGCAAATGGTGGCAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATAAAGAATTGGATGAAAGCAAAAATAATCTGAATGGTACATCTAGCTCAAGCACAAACTTAAATGGAATAACTGGTAGTGATTCCATGAATGGAGACGCCTTGAACTTTGAAAGCAAAAAGACAAGTGCTTCACATGATATGGGATTCTTCAGGTTTGAGGCATCGGACAATGAAGAGTTGTTTGGGGACAGGCCTTTGCCTGATTGGGTGGGATGGGGTGAACCTTCAGATATGCAAGATGCTGGATCAAGCAAGAACCCATTTATAGATCACGATGATTCTTCTGGTAGCAACCTTTGTACTACCAAACCTCAAATAGATAGCCCTACTCCGAGTCCTCCTTCAAATGGGGAATCTGTTCCTTCAAACAGGTCACCAACTAAAGAAGATTCGATTGATGGGGGTGTTGACTCGAGTCAAAGAGCAGTACCTGTACCATCGCTCTTCGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTCTGAAAGAAGGGATAGTTGGGGAGGCAGGACCATTGAAAAGAAACATGGTCTCTAAAGTGCCAGAAAAGGAAAGTACTGACGAGGGTGGTCCTGGAATAAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAGGAGGTTGCTGTTCTAGAGTGA 2562 0.4126 MFWKLASLSASSPVETILDKENFTLEELLDEEEVIQECKALNSRLINFLRDQAQVEQLLRYIIEEPPEDAENKRAFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPNRSHSTLLAGYFSKVVVCLMIRKTVPLMKYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHMYHNFIDVMQWLAESNLLEMIVHKLSPSSPPEVHANAAETLCTITRNPSSTLAIKLSSPSFVAKILDHALEDSQSKSSLVNSLSVCVSLLDPKRSAISSPLFHSFRSQHMYEPPIPVNPDTIGAALPKLSELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKEMVNSGTIQRVIDLFFEYPYNNSLHHHVESIILSCLESKTNAIVEHLLQECNLIGRFLQADKRSTLSADINMPTVPAAGKQVPRAGNIGHITRIVNKLVHLAHNRNLILTCLQENSEWNEWQASVLQERNVVENVHRWACGRPTALQDRMRDSDDDELHDRDYDVAALANNLNQAFRYKIYGNEDNEEERGNLDRDDEDVYFDNDSAQVVISSLRLSDDQGSSLFTNSNWFEFQDDRIGDATGGTTSSEMMDEINLNGAANGGNSSDDEVVVGEDKELDESKNNLNGTSSSSTNLNGITGSDSMNGDALNFESKKTSASHDMGFFRFEASDNEELFGDRPLPDWVGWGEPSDMQDAGSSKNPFIDHDDSSGSNLCTTKPQIDSPTPSPPSNGESVPSNRSPTKEDSIDGGVDSSQRAVPVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVSKVPEKESTDEGGPGIKEFNDANYWRVDQEVAVLE* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1465 853 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Gso12g1465 853 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Gso12g1465 853 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 851 IPR007587 GO:0019903|GO:0043666
Gso12g1465 853 MobiDBLite consensus disorder prediction 696 777 - -
Gso12g1465 853 MobiDBLite consensus disorder prediction 613 658 - -
Gso12g1465 853 MobiDBLite consensus disorder prediction 710 737 - -
Gso12g1465 853 Gene3D - 88 425 IPR011989 -
Gso12g1465 853 SUPERFAMILY ARM repeat 179 392 IPR016024 -
Gso12g1465 853 MobiDBLite consensus disorder prediction 639 658 - -
Gso12g1465 853 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1465 Gso-Chr12 37542155 37550959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1465 K15501 - gmx:100777597 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1465 12 37542155 37550959 Gso11g3376 11 49644721 49653604 GST
Gso12g1465 12 37542155 37550959 Gso12g0625 12 5858212 5867635 PCT
Gso12g1465 12 37542155 37550959 Gso11g1504 11 17551115 17560629 PCT
Gso12g0625 12 5858212 5867635 Gso12g1465 12 37542155 37550959 PCT
Gso11g1504 11 17551115 17560629 Gso12g1465 12 37542155 37550959 PCT