Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0625 ATGTTCTGGAAGCTCGCCTCTATCTCTTCCTCCTCTCCCGTGGAGGTAATATTGGACAAGGAGAACTTCACTTTAGAAGAACTTCTAGATGAAGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTTATCAACTTTCTGAGGGATAGAGCTCAGGTTGAGCAATTGCTACGCTACATCATAGAAGAACCACCGGAGGATGCTGAAAACAAACGGGTCTTCAAGTTTCCATTCATTGCCTGTGAGATCTTTACATGTGAAATTGATGTAATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTATTCTCCTTCTTGGAGTCTGATCGTTCTCATAGTACCTTACTGGCTGGGTACTTTAGCAAGGTTGTCATTTGCCTAATGATACGAAAGACAGTACCACTTATGAATTATGTTCAAGCCCATCAGCATGTTTTTCGTCAACTGGTAGATTTGATAGGCATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATGTATATCCCAATTTTATAGATGTGATGCAATGGTTAGCTGAGAGCAACCTGCTTGAGATGATTGTCGATAAATTAAGTCCATCTAGTCCTCCTGAAGTTCATGCCAATGTAGCTGAAACTTTGTGTACCATAACTCGAGTTGCATCATCTACTCTAGCTATTAAGCTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGGTTATGCATTGGAAGATTCACAATCAAAGTCTAGCCTTGTCAACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAAATCAGCTATTTCATCTCCACTTTTTCATTCATTCCGAAGTCAAAACATGTATGAGCCACCAATTCCTGTAAATCCAGATACTATTGGTGCAATGCTACCTAAACTTGGTGAATTCCTTGTGCTTTTGGATTTGTCATCTGATAATAAGGTACTGCCTACAACATATGGTGAATTGAGACCTCCGCTTGGCAAGCATCGATTAAAGATCGTGGAGTTTATTGCAGTACTTCTAAAAACTGGAAATGAAGTGGCAGAAAAAGAATTGGCCAACTCAGGAACCATTCAACGAGTCATTGATCTTTTCTTTGAGTATCCATACAATAACTCATTGCACCATCATGTAGAAAGTATCATATCATCATGTCTGGAGAGCAAATCTAATGCCATCATTGATCATCTTCTTCGAGATTGTGATTTAGTTGGAATGTTTCTCCAAACAGATAAACATTGTATTCTTTCGGCCGAAAGCAGTCAGCCCACAGTACCTGCTGCTGGAAAACAGGGAACACGGGTAGGAAACATTGGACATATTACTCGAATTATCAATAAACTTCTTCACTTGTCTCATAACCAAAGCCACATTCTGGCATGTCTCCAGGAGAATAGTGAGTGGAATGAGTGGCAAGCTACAGTTCTTCAGCAGCGTAATGTGGTCGAGAATGTTCACCGTTGGGCTTGTGGACGTCCAACTGCATTACAAGATAGGATGAGGGATAGTGATGATGAAGACCTTCATGACAGAGACTATGATGTTGCAGCTTTAGCAAATAATTTAAGCCAGGCTTTTAGATACAAAATTTATGGAAATGACAATAATGAAGAGGAACATGGTGGTCTTGATCGAGATGATGAGGATGTCTACTTTGACAATGATTCTGCTGAAGTAGTCATATCATCCCTTAGACTTGGTGATGATCAAGGGAGTAATTTGTTTACAAATTCCAACTGGTTTGCCTTCCAAGATGACAGAATTGGTGATGCACCTGGGAGCACATCATCCTCTGAGATGATGGATGAGATAAAATTGAATGCAGTTGCAAATAGTGGTAGCAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAATTGGCTGACAGCAAAAATACTGTGAATGGTACATCTAGCTTAAGTGCAGACTTCTTTAGTGGATTGACTGCCAGTGATTCCATGAATGGGGGCACTTTAAACTTTGAAAGTGAGAAGACAAGTCCTTCAAATGATATGGGATTCTTCAGGTTTGAGGCACCAGACAACGAGGACTTGTTTGGAGATAGGCCTTTACCTGATTGGGTTGGATGGGGTGAACCATCAGAAATGCAAGATGCTGGCTCAAGTATGAACCCCTTTCTGGATAATGACGAGTCTGGTAGGCCTCAAGTAGGCAGCCCTAATCTTAGTTCTCCTTCAAATGGGGAATCCGTACCTTCAAATGGGTTGCCAACTACTAGCGATTCTATCAATGGGAACAGTGACTCAAGTCCAACATCTGTAGCGGTACCCTCGCTATTTGAAGAGGATGTGGAATTTGTAGGTGTAGAATTAGAAGGTACAGAGAAGGCAATGGACCAGGCTCTCAAAGAAGGGATAGTTGGGGAAGCAGGACCATTGAAAAGAAACGTAGTCTCAAAAGTTCCAGATAAGGAAAATTCTGAAGAAGGCAGTCCTGGTGTGAAGGAGTTCAACGATGCAAATTACTGGAGGGTTGACAACGAGGTTGCTGTTCTAGAGTGA 2547 0.4115 MFWKLASISSSSPVEVILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYIIEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLESDRSHSTLLAGYFSKVVICLMIRKTVPLMNYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLSPSSPPEVHANVAETLCTITRVASSTLAIKLSSPSFVAKILGYALEDSQSKSSLVNSLSVCISLLDPKKSAISSPLFHSFRSQNMYEPPIPVNPDTIGAMLPKLGEFLVLLDLSSDNKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKELANSGTIQRVIDLFFEYPYNNSLHHHVESIISSCLESKSNAIIDHLLRDCDLVGMFLQTDKHCILSAESSQPTVPAAGKQGTRVGNIGHITRIINKLLHLSHNQSHILACLQENSEWNEWQATVLQQRNVVENVHRWACGRPTALQDRMRDSDDEDLHDRDYDVAALANNLSQAFRYKIYGNDNNEEEHGGLDRDDEDVYFDNDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRIGDAPGSTSSSEMMDEIKLNAVANSGSNSSDDEVVVGEDEELADSKNTVNGTSSLSADFFSGLTASDSMNGGTLNFESEKTSPSNDMGFFRFEAPDNEDLFGDRPLPDWVGWGEPSEMQDAGSSMNPFLDNDESGRPQVGSPNLSSPSNGESVPSNGLPTTSDSINGNSDSSPTSVAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNVVSKVPDKENSEEGSPGVKEFNDANYWRVDNEVAVLE* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0625 848 MobiDBLite consensus disorder prediction 688 772 - -
Gso12g0625 848 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 846 - -
Gso12g0625 848 MobiDBLite consensus disorder prediction 712 771 - -
Gso12g0625 848 Pfam SIT4 phosphatase-associated protein 131 356 IPR007587 GO:0019903|GO:0043666
Gso12g0625 848 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Gso12g0625 848 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 846 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0625 Gso-Chr12 5858212 5867635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0625 K15501 - gmx:100790416 1637.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0625 12 5858212 5867635 Gso11g1504 11 17551115 17560629 GST
Gso12g1465 12 37542155 37550959 Gso12g0625 12 5858212 5867635 PCT
Gso11g3376 11 49644721 49653604 Gso12g0625 12 5858212 5867635 PCT
Gso12g0625 12 5858212 5867635 Gso12g1465 12 37542155 37550959 PCT
Gso12g0625 12 5858212 5867635 Gso11g3376 11 49644721 49653604 PCT