Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1105 ATGGATGCAGATGCAGCTCCTTTGCACATAGCAATGTATCCATGGTTTGCTATGGGGCACCTCACCCCATTTCTCCACCTTGCCAACAAGTTAGCCAAAAGGGGACACAAAATCTCCTTCTTCATACCCAGAAGAACACAAGCCAAGTTAGAAGACCTCAATCTTCACCCAAACCTCATCACCTTTGTCCCCATCAATGTTCCTCACGTTGATGGTCTTCCTTATGATGCAGAAACCACTTCAGATGTTCCCTCCTCTTTGTTCCCACTCATTGCCACTGCCATGGACCTCACAGAGAAAAACATTGAACTTCTCCTCCTTGATCTCAAACCACACATCGTTTTGTTCGATTTTTCCACATATTGGCTACCAAACTTGGCTCGTAGAATAGGAATAAAGTCTCTTCAGTACTGGATTATTAGCCCTGCAACAGTAGGGTACATGGCATCCCCAGCTAGACAAAGAGAAGATGACATGAGAAAGCCACCTTCAGGGTTCCCTGATTGTTCCATCAAGCTGCATGCACATGAAGTTCGGTTCCTTGCTGCAGCAAGGAAACTAGAGTTTGGCAATGGTGTTCTTTTCTATGATCGTATCTCAGTTGGTGCAGATTTGTCTGATGCTATTGGATTCAAAGGTTGTAGAGAAATTGAAGGGCCTTATGTGGACTATCTAGAGACACAATTTGGTAAGCCCGTTTTGCTTACAGGTCCTCTTGTGCCCGAGCCATCAAATTCAACTTTGGACGCAAAATGGGGTGAATGGCTTGGTAGATTCAAAGCTGGTTCAGTGATTTACATTGCATTTGGAAGTGAACACTCTTTGCAGCAAAACCAATTGAATGAGTTGTTGTTGGGTCTTGAGCTAACAGGAATGCCATTTTTTGCAGCACTTAAGCCCCCTATTGAGTTTGAGTCCATTGAGAAAGCTCTCCCAAAAGGGTTCAAAGAAAGGGTTCAAGAAAGAGGGGTTGTGTATGGGGGGTGGGTGCAGCAACAGTTGATCTTGGCACACCCTTCTGTTGGGTGCTTCATAACTCACTGTGGTGGAGCTTCTCTAACTGAGGCACTTGTGAACCGGTGTCAGTTGGTGCTGTTGCCACGACTTGGTTCCGATTTCATCATCAATGCAAGAACCATGGGGGGAAAATTGAGGGTTGGTGTGGAAGTTGAGAAAGGGGAAGAAGATGGTTTGTTCACAAAGGAAAGTGTGTGTAAAGCTGTGAAAACTGTGATGGATGATGAGATTGATCAGCTTGGCAGAGAAGTCAGAGCAAATCACAACAAAGTGAGGAGCCTCTTGCTAAGTAACAATTTCGAGTCATCTTGTGTAGATGCTTTCAGCCACAGGCTTCAGGATTTAGTCTAA 1368 0.4488 MDADAAPLHIAMYPWFAMGHLTPFLHLANKLAKRGHKISFFIPRRTQAKLEDLNLHPNLITFVPINVPHVDGLPYDAETTSDVPSSLFPLIATAMDLTEKNIELLLLDLKPHIVLFDFSTYWLPNLARRIGIKSLQYWIISPATVGYMASPARQREDDMRKPPSGFPDCSIKLHAHEVRFLAAARKLEFGNGVLFYDRISVGADLSDAIGFKGCREIEGPYVDYLETQFGKPVLLTGPLVPEPSNSTLDAKWGEWLGRFKAGSVIYIAFGSEHSLQQNQLNELLLGLELTGMPFFAALKPPIEFESIEKALPKGFKERVQERGVVYGGWVQQQLILAHPSVGCFITHCGGASLTEALVNRCQLVLLPRLGSDFIINARTMGGKLRVGVEVEKGEEDGLFTKESVCKAVKTVMDDEIDQLGREVRANHNKVRSLLLSNNFESSCVDAFSHRLQDLV* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1105 455 Gene3D Glycogen Phosphorylase B; 254 434 - -
Gso12g1105 455 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 436 - -
Gso12g1105 455 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 328 415 IPR002213 GO:0008194
Gso12g1105 455 PANTHER GLYCOSYLTRANSFERASE 4 453 - -
Gso12g1105 455 CDD GT1_Gtf-like 8 425 IPR002213 GO:0008194
Gso12g1105 455 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 4 453 - -
Gso12g1105 455 Gene3D Glycogen Phosphorylase B; 2 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1105 Gso-Chr12 15070051 15072264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1105 5 455 Glycosyltransferase AT5G54010 47.345 2.83e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1105 K22794 K12933 gmx:100820538 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3070 11 46562932 46564486 Gso12g1105 12 15070051 15072264 PCT