Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3070 ATGTGCAGAGAAGCTGCAAACTTGTCCAGGCAAACAAACATGGATGCATCTTCTATGCACATAGCAATGTTTCCATGGTTTGCCATGGGACACCTAACTCCATATCTTCACCTCTCAAACAAATTAGCAAAGAGGGGACACAGAATCTCCTTCTTCATCCCCAAAAGAACGCAACACAAGTTAGAGCAATTCAACCTGTTCCCACATCTCATCACCTTTTACCCTATCAATGTTCCTCATGTTGAAGGCCTTCCCCATGGCGCAGAAACCACTTCTGATGTCTCTTTCTCTTTAGGTCCACTCATTATGACAGCCATGGATCGCACTGAGAAAGACATAGAGCTTCTTCTCATTGAGTTAAAGCCACAAATTGTTTTCTTTGACTTCACATATTGGCTACCAAACTTGACTCGTCGCTTGGGAATCAAATCTTTTCAATACATGATTGTTAGCCCAGCAACAGTAGCTTACAATGCATCCCCACCAAGGATGCAAAACAGTGTTAACTTAACTGAAGTTGATCTTATGCAACCCCCTCTTGGGTACCCTGTCTCATCCATCAAGCTTCATGCACATGAAGCTAAGTTTCTTGCTTCTAAGAGGAATTGGGAGTTTGGTAGTGGTGTTCTCTTTTATGACCGTCTTTACGGCGGTTTAAGCCTATCTGATGCAATTGGATTCAAAGGTTGCAGGGAAATTGAAGGGCCTTATGTTGATTACCTTGAAGAACAGTTTGGGAAGTCTGTTCTGCTTTCAGGACCTATCATACCTGAGCCACCCAACACTGTTTTAGAGGGAAGATGGGGTTCATGGCTTGAAAGGTTCAAGCCTGATTCAGTTATTTTCTGTGCTCTTGGTAGTGAATGGAAATTACCACATGATCAATTCCAAGAATTTCTGTTGGGTCTTGAACTCACTGGCCTTCCATTTTTGGCTGTTTTAAAAACTCCTATAGGGTTTGAGACACTTGAAGCTGCTCTCCCAGAAGGGTTCAAGGAAAGGGTTGAAGAGAGAGGAATTGTCCACGGTGGATGGATACAGCAACAGTTGATTTTGGAACACCCTTCAGTGGGTTGCTTCATAACACATTGTGGTGCTGGTTCATTAACTGAGGCACTAGTGAATAAGTGCCAAATAGTGTTACTGCCACAGGTAGATGGTGATCATATAGTTAATGCAAGGATGATGGGTGAAAACTTAAAGATTGGGGTTGAAGTGGAGAAGGGTGAAGAAGATGGCTGGTTCACGAAGGAGAGTGTAAGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAAGTTGGCAGAGAAGTGAGGACAAATCATGCAAAATTGAGGAACTTCTTAGTAAGCCACAATTTGGAGTCCGCATGTGTTGATGGATTTTGTCAGAAGCTTCGAGATTTACTCAAGTGA 1416 0.4273 MCREAANLSRQTNMDASSMHIAMFPWFAMGHLTPYLHLSNKLAKRGHRISFFIPKRTQHKLEQFNLFPHLITFYPINVPHVEGLPHGAETTSDVSFSLGPLIMTAMDRTEKDIELLLIELKPQIVFFDFTYWLPNLTRRLGIKSFQYMIVSPATVAYNASPPRMQNSVNLTEVDLMQPPLGYPVSSIKLHAHEAKFLASKRNWEFGSGVLFYDRLYGGLSLSDAIGFKGCREIEGPYVDYLEEQFGKSVLLSGPIIPEPPNTVLEGRWGSWLERFKPDSVIFCALGSEWKLPHDQFQEFLLGLELTGLPFLAVLKTPIGFETLEAALPEGFKERVEERGIVHGGWIQQQLILEHPSVGCFITHCGAGSLTEALVNKCQIVLLPQVDGDHIVNARMMGENLKIGVEVEKGEEDGWFTKESVSKAVKIVMDDENEVGREVRTNHAKLRNFLVSHNLESACVDGFCQKLRDLLK* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3070 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 345 431 IPR002213 GO:0008194
Gso11g3070 471 Gene3D Glycogen Phosphorylase B; 268 450 - -
Gso11g3070 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 17 451 - -
Gso11g3070 471 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 16 468 - -
Gso11g3070 471 CDD GT1_Gtf-like 19 446 IPR002213 GO:0008194
Gso11g3070 471 Gene3D Glycogen Phosphorylase B; 13 265 - -
Gso11g3070 471 PANTHER GLYCOSYLTRANSFERASE 16 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3070 Gso-Chr11 46562932 46564486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3070 16 471 Glycosyltransferase AT5G54010 48.359 2.03e-159 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3070 K22794 - gmx:100808470 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3070 11 46562932 46564486 Gso12g1105 12 15070051 15072264 PCT