Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0929 ATGAATCATAATCATAATCATTTGCAAATTCCTATCGAATCAGATGACTCAAGCTGGAGACAGAGATGCAACAGGAGGATGGAGGAACTGAAGAACACACAATTCTCAAGTCAAGAGGCAGCAGCTTCTTCACAACCGGTGAGACTATTATTGCATAAGGAACTTGTTGGAAAAGTTATGGTTCGCGAGTTGTACAATGCTGTTGAAGATGGGAATGTGGATAACTTTGTTGGGGTTTTGAATCAACAATGCAGAAAAAGGAAACTATCTTTGTCTGATATTTTTTATCAAGTCACTGGAGCAGGTGATTCATTGCTTCACGTGGCAGCATATCATAAGGGAGAGCATATTGCTGAGCTGATTGCTCATCATTTTCCTGAGCTTCTTATTAGGAGAAACGTAAGAGGAGATACTCCACTTCATGTTGCTGTGAGGTCCAAGAACTCTACTATAGTCAACATCATTCTCTCACAATATGCCATAGAGAAGTCAAACCATGAAGAGATGAATGATAAAGAGATAACAAGAGAAACAAATGAACATGGGGATACTCCTTTGCACGAGGCTATCCACAGTGGGGATGTTGATGTGATAAAGGAGATTTTTTGTGCAGATAACGATGTGGTTCATTATTTGAACAAGTCAAGGCGATCACCACTGTATTTGGCAGTAGTGAATGGGAATGTGGAAATTCTGAATCTTCTATTGGAAATTCCATTCCCTGTGGATCTTCCACAGTGCCTTGGAAACTCTCCACTCCATGCAGCCCTGTTAGAACGGAAATCTGACGAAGAGGAAGACCGAACCGTGGAGAAACACTTAGATGGAGTATATGAGAACAAGTGGGACTCCCTCTGGAGTAGCATGTTGAGAAAGAGGAAAGATCTAATAAATGGGATACTAGCAAAAAGACCAGAACTAGTTTACTTAAGAGATGAAGATGGAGGTACTCCCCTTCATTATGCAGCTTATATCGGTTATGTTGAGGGATTTCATATACTCTTAGAAAATTCAATTGATAGTTCAAATCAAACTGCCTTGGAAGGGAACAAAAAGGGTCATCTTCCTATTCACCTTGCTTGCAAAAAGGGTCATGTTAGGGTGATAAATGATTTTCTTCAACATGAATGGCCTATTAATCTTCTCCTCAACCAAAAATGTCAAAACATTCTTCATGTTGCAGCGAAAAATGGAAAAAGTAAAGTGGTACAATACCTATTGAAAAATTCGAAGATCGACCAATTTACTATAAACCAGAAAGACAATGATGGAAACACTGCATTGCATTTGGCTTCAATAAATTTGTTTCCTAAAGTTTTGTACTTCATCACTCAAGATAAGAAGACTGATGTTAACTGCTCGAATAACGACGGCTTTACGGCTCGGGATATCGTTCATCTAGCTTCGAAAAAGCAAATGACAATTCGAAAGTTCCTTGCTAATCTAGTATTAAAAGAAGCTGGTGCCCTCCTAAAAGTAAATGATATGTTGAGTTCTCAATGGCAACAATCGCCCAGAATGCAATTGAGCTTAAAAGATCTCATCAACACATTTTTAGTTGTGGCAACGTTGATGGTCACTGTGACATTTGCTGCTGGTTTCACTGTGCCTGGAGGCGTATATAGTTCAGATGCTAAAGACCCAAAAAATATAGGGATGGCAATTTTGGCTGATAAACCATTTTTTTGGGTATTCACCACCTTCAACATGATAGCTATGTATAGCTCTGTTATTGCATGTGGACTCATGTTGATGGCACTGATTTTTGATCATAAATTGGCAACAGGAGCAACTATCCTTGCAATGTGTTGTTTGGTTCTTGCCTTTTCAACCGTACCAATTGCATTTATGGCTGCAGTACATCTAGTTGTGGCCAACAACTATGCTCTTTCCCGTACTATTATTGTCATTGGAGTTGTGTACACTTCCCTCATCTTGTTGGGTTTATTTTTTGGATTTTTTCCAATTGGAATTCGCCTTCTTCTATTTCGTCATGTTGGTAGACTCGTTCTTCGGATTCTAATTGCATTGACAAAATATGATGATAGGCCTGAAGATTCATTGCCTCAGAAAGAAAACAATGACAAGGATGATTAA 2097 0.3896 MNHNHNHLQIPIESDDSSWRQRCNRRMEELKNTQFSSQEAAASSQPVRLLLHKELVGKVMVRELYNAVEDGNVDNFVGVLNQQCRKRKLSLSDIFYQVTGAGDSLLHVAAYHKGEHIAELIAHHFPELLIRRNVRGDTPLHVAVRSKNSTIVNIILSQYAIEKSNHEEMNDKEITRETNEHGDTPLHEAIHSGDVDVIKEIFCADNDVVHYLNKSRRSPLYLAVVNGNVEILNLLLEIPFPVDLPQCLGNSPLHAALLERKSDEEEDRTVEKHLDGVYENKWDSLWSSMLRKRKDLINGILAKRPELVYLRDEDGGTPLHYAAYIGYVEGFHILLENSIDSSNQTALEGNKKGHLPIHLACKKGHVRVINDFLQHEWPINLLLNQKCQNILHVAAKNGKSKVVQYLLKNSKIDQFTINQKDNDGNTALHLASINLFPKVLYFITQDKKTDVNCSNNDGFTARDIVHLASKKQMTIRKFLANLVLKEAGALLKVNDMLSSQWQQSPRMQLSLKDLINTFLVVATLMVTVTFAAGFTVPGGVYSSDAKDPKNIGMAILADKPFFWVFTTFNMIAMYSSVIACGLMLMALIFDHKLATGATILAMCCLVLAFSTVPIAFMAAVHLVVANNYALSRTIIVIGVVYTSLILLGLFFGFFPIGIRLLLFRHVGRLVLRILIALTKYDDRPEDSLPQKENNDKDD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0929 698 Pfam Domain of unknown function 511 622 IPR026961 -
Gso12g0929 698 ProSiteProfiles Ankyrin repeat profile. 135 160 IPR002110 GO:0005515
Gso12g0929 698 ProSiteProfiles Ankyrin repeat region circular profile. 181 208 - -
Gso12g0929 698 ProSiteProfiles Ankyrin repeat profile. 181 208 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 386 414 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 181 210 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 352 381 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 101 130 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 135 165 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 423 453 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 314 343 IPR002110 GO:0005515
Gso12g0929 698 SMART ANK_2a 215 244 IPR002110 GO:0005515
Gso12g0929 698 ProSiteProfiles Ankyrin repeat region circular profile. 215 237 - -
Gso12g0929 698 Pfam Ankyrin repeats (many copies) 373 431 IPR002110 GO:0005515
Gso12g0929 698 Gene3D - 57 277 IPR036770 -
Gso12g0929 698 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 126 642 - -
Gso12g0929 698 ProSiteProfiles Ankyrin repeat region circular profile. 314 340 - -
Gso12g0929 698 SUPERFAMILY Ankyrin repeat 102 462 IPR036770 -
Gso12g0929 698 Gene3D - 283 503 IPR036770 -
Gso12g0929 698 ProSiteProfiles Ankyrin repeat region circular profile. 135 160 - -
Gso12g0929 698 ProSiteProfiles Ankyrin repeat profile. 314 346 IPR002110 GO:0005515
Gso12g0929 698 Pfam Ankyrin repeats (3 copies) 106 203 IPR002110 GO:0005515
Gso12g0929 698 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 126 642 - -
Gso12g0929 698 ProSiteProfiles Ankyrin repeat profile. 215 237 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0929 Gso-Chr12 10940023 10944658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0929 135 647 Miscellaneous Gene Families AT5G60070 26.128 3.18e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0929 - - gmx:102660446 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0929 12 10940023 10944658 Gso6g2410 6 45741823 45746422 GST