Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0880 ATGGCAACAAGAGGGGGAGGCTCTGATGATTCATGGGTGGCGAAGACCCACAAAGCGATGAAGAAGGCTAACAATTCGGTTATTGGTTACGTGACTTCCAAGTCTCACTGGCCATTGCCTCATGGCCACATAAGCTTGAGGCCTCAACACAAGAGTGTGGAGAAGATTATGAGCATGGGTTTTGATCTCTTTAGGCATAAGAAACCTTCAAACGACGAGGTGGTTCATGAGTTGCGTCTGCTTGATAACCGTTTGACCCAATGGCGGTTTGCAAATGCCAGAGCTCATGTTGTGAATCATAGAATGTCTCTTCTGGCTAAGGGAAATTTGATAGGTGCTTTGGATGGTCTAGCCAATTTGAGATATTCAGTGGTGCTATTGAAGATAGAGTTTGAGAGAGAAAAGCTTGAGCTGAAGCTAGATGATGTAATACATTCTCAAATGAAGCTATTGCAAGTGTGGGGAAGTATAGAAAGGCGACATGTAACCGCAATTACAATAATATACGAGTGCTTGTATGCTGTTGCATGTAGACTTCATCTTTTGGATGGTGCAATGGATATAGAATTAGCATCCATTGCTCAAAGTCATGCATTGGACCTAACAAATTCGATTGAGTCATTGTTATCTACTTTTTCACCCTTGGCTGATGAGACTGCTGAGCTATTATCAGAATTAGCAGAAGTTGTTACACAAGAGAGGTTCCTCTTAGAGGAATTCGATGATATCTTCCACACCATACGTGTTCTAGAGGGTGCTTTTGTTTTTGATGGAACAAAAAAGAAGTAA 789 0.4183 MATRGGGSDDSWVAKTHKAMKKANNSVIGYVTSKSHWPLPHGHISLRPQHKSVEKIMSMGFDLFRHKKPSNDEVVHELRLLDNRLTQWRFANARAHVVNHRMSLLAKGNLIGALDGLANLRYSVVLLKIEFEREKLELKLDDVIHSQMKLLQVWGSIERRHVTAITIIYECLYAVACRLHLLDGAMDIELASIAQSHALDLTNSIESLLSTFSPLADETAELLSELAEVVTQERFLLEEFDDIFHTIRVLEGAFVFDGTKKK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0880 262 Pfam QWRF family 47 238 IPR007573 -
Gso12g0880 262 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 13 249 - -
Gso12g0880 262 PANTHER AUGMIN FAMILY MEMBER 13 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0880 Gso-Chr12 9862630 9864418 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0880 - - gmx:106795262 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0880 12 9862630 9864418 Gso6g2443 6 46116922 46119218 GST
Gso11g3161 11 47450531 47453896 Gso12g0880 12 9862630 9864418 PCT
Gso12g0880 12 9862630 9864418 Gso11g3161 11 47450531 47453896 PCT