Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3161 ATGAAAACGCCAAACGGCTCTCCGGTTTCTAGTTCATCTCCGAAACCTCGTCACCACCGAAACCGCGAACCCGGTTCAGCCACACACTCCAGCGAATGCCACTCCCCGGTCCGACGCAAATCCTCGAGCCCCGGCCGGCCACACGTCGTCATCACGGAGGACGCCGGTCCCACGCGCCACCAACTATGGCCTTCCACCGCGAAGAGAAGCTCCGGAACACTCGCCGATCACATAACCGAAGACAGAATCATAGAGCGCACTTCAACCGCAAATAACAACACACCCACAACAATTGGTGGCTCCGCGCGACACGTGGCAAGATTTTCAACACCCTCAGAATCTAAGAAACTAAGTTATAATAACAACAACATTGCTCCTGGAAGATTGTCGTTGGATGAAAACGCTAAGTCCTTCTCTTCTCGGAGACACTCCAGAAACTCTCTTGAATTAGACTCTGACGCGGGAAAAAAATTAACGTCAAAAAAAGCAGACCTGGAAGTTGCTAAAAGTGATGCAACAACAACGCCGAGAAGGGCTAGGAGAGGAACTTCAGATTCCAACGTTGCGAACTTGAATGGTGATTCCTCCTCCTCCGTTTTGAAACGGTTCACGTTGAAAACTGCTATAAGGAGGGCGAATTCGCTCGCTGGAACGTACAAGAGTTCCAAGACTTCGTGGGCTTTGTCTCCGGGGAGGTCGGAGTCACCGGCTATGTCGGTTGAGAGCATGGATAAAGCGGTGTCGTTTTCGAGCTTCAAGGTCCCACCCACTAGTCCTACGAAGGTGAAAGGGGTGGAGAAGTTACTCAACATGGGTTTTGATCTCTTCAAGGGTAAGAAAAGTGGTGGCTTTGGCTCTTTGTCGCCCGTTGGTTTTGGAGTTCACTCGGAGGTTGTTCATAGGCTTCGTTTGCTTGATAATCGCTTGGTTCAATGGCGGTTTGCGAATGCTAGAGCACAAGTTGTCAATGGAAACACTTCTCACAAGGCTCAGAGCAATTTGATATGTGTTTGGGACGGTCTCACAAAGTTACAGCAATCTGTTCTGAAAAAGAAGATACAGTTTGTCAGAGAAAAACTTGAAATGAAGATCGCTTTTGTACTGTATTCTCAAATGAAGCTACTGGAAGCTTGGGGAGGAATGGAAAGGCAACACTTACTAGCAATTACTGCCATCAAAGAGTGTTTGCATTCGGTTGTTTGCAGAGTTCCTATTTTGGAAGGTGCTAAGGTGAACATGCAACCAACGTCCATTGCTCTACGGCATGCATCTGATCTCACAGTTTCCATCAAGTCAATTTTAACTACTTTTTCATCCTCAGAGGTTGATAAGATTTCAGCAACGCTATCAGAATTAGCAAAAGTTGTTGCACGAGAGAAACAGCTCTTAGAGGAGTTCTATGATCTTTTCCAGGCCATATGTGTCTTTGAGGTTCAGGAAAGAAGTGTAAAGTGCAATCTCGTTCAACTTGAAGGTTGGCAACAAAAATATCAACGGCAGCAATTACTACCAGAGATCACTTCATAG 1527 0.4682 MKTPNGSPVSSSSPKPRHHRNREPGSATHSSECHSPVRRKSSSPGRPHVVITEDAGPTRHQLWPSTAKRSSGTLADHITEDRIIERTSTANNNTPTTIGGSARHVARFSTPSESKKLSYNNNNIAPGRLSLDENAKSFSSRRHSRNSLELDSDAGKKLTSKKADLEVAKSDATTTPRRARRGTSDSNVANLNGDSSSSVLKRFTLKTAIRRANSLAGTYKSSKTSWALSPGRSESPAMSVESMDKAVSFSSFKVPPTSPTKVKGVEKLLNMGFDLFKGKKSGGFGSLSPVGFGVHSEVVHRLRLLDNRLVQWRFANARAQVVNGNTSHKAQSNLICVWDGLTKLQQSVLKKKIQFVREKLEMKIAFVLYSQMKLLEAWGGMERQHLLAITAIKECLHSVVCRVPILEGAKVNMQPTSIALRHASDLTVSIKSILTTFSSSEVDKISATLSELAKVVAREKQLLEEFYDLFQAICVFEVQERSVKCNLVQLEGWQQKYQRQQLLPEITS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3161 508 MobiDBLite consensus disorder prediction 179 193 - -
Gso11g3161 508 Pfam QWRF family 156 464 IPR007573 -
Gso11g3161 508 PANTHER AUGMIN FAMILY MEMBER 13 501 - -
Gso11g3161 508 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 13 501 - -
Gso11g3161 508 MobiDBLite consensus disorder prediction 135 178 - -
Gso11g3161 508 MobiDBLite consensus disorder prediction 1 76 - -
Gso11g3161 508 MobiDBLite consensus disorder prediction 135 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3161 Gso-Chr11 47450531 47453896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3161 - - gmx:102668093 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3161 11 47450531 47453896 Gso12g0880 12 9862630 9864418 PCT
Gso11g3161 11 47450531 47453896 Gso6g2443 6 46116922 46119218 PCT
Gso12g0880 12 9862630 9864418 Gso11g3161 11 47450531 47453896 PCT
Gso6g2443 6 46116922 46119218 Gso11g3161 11 47450531 47453896 PCT