LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso12g0869	ATGTATCACCTTGACCAAGGTTTTGTTTTCCACCATGTTGCAGAGATTGATACAAGAGAAGAATCTAAGGCAGCTATGGAGAACAATGAGCCTCCAAGGCGTCTTGAGGGAAAACATGCTGCAATGGCAGTTTGCTGGCTTCTTGGCACTGGGTGCCTTTTCGCGTGGAACAGTATGCTGACTATAGAAGATTACTATGTTTACTTGTTTCCGAAATACCACCCGTCTAGGGTGCTTACTCTTGTATATCAGCCATTTGCAGTTGGAACACTAGCAATACTGGCTTACAAAGAGGACAGAATCAATACAAGGATAAGAAACTTATTTGGATATACTCTTTTCTTCATAAGCACTTTGTCGATCTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGCCTTGGAACTTTTATTGGTATATGCGTAATTAGTGGTGCATTTGGAATAGCAGATGCTCATACGCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGCTTGGCAGCATCAGGTGCACTAACATCTGCTTTGAGGTTGATTACAAAAGCAGCCTTTGAAAATTCTAAGAATGGTCTTCGCAAAGGAGCCATTATGTTCTTTGCCATATCAACATTCTTTGAGCTTCTTTGTGTTCTTCTCTATGCGTTTGTATTCCCTAAATTACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACAGTATCAGCTGACCTTGCTGCAGGTGGCATCCAGATCCCATCTGGAAGAGCCAATCAATATGAAAAAGAAATAGATCGCAAAGGAAATAAGAAACTGTTATTGGAAAACATTGATTATGCACTTGATTTGTTCCTAATATATGCGCTTACACTTTCAATTTTCCCTGGATTCTTATCAGAAGATACTGGATCACACAGTTTAGGCACCTGGTATGCACTTGTTTTAATAGCTATGTACAATGTGTGTGATCTGATTGGAAGATACATTCCACTCTTGAAATTTCTAAAGTTGGAATCTCGAAAAAAGCTGACCACAGCAATTGTTAGTCGCTTGTTATTTGTGCCGGCGTTTTATTTTACTGCGAAGTATGGCACACAGGGCTGGATGATAATGTTGACATCTTTTTTGGGGTTATCCAATGGCTACTTCACTGTTTGTGTTCTCACTTCAGCACCCAAAGGTTACAAGGGACCGGAACAAAATGCCTTGGGAAATTTGTTGGTGTTGTTTCTTCTTGGAGGTATCTTTGCAGGGGTAACACTTGATTGGTTTTGGTTAATAGGTAAAGGGTGGTGA	1320	0.4053	MYHLDQGFVFHHVAEIDTREESKAAMENNEPPRRLEGKHAAMAVCWLLGTGCLFAWNSMLTIEDYYVYLFPKYHPSRVLTLVYQPFAVGTLAILAYKEDRINTRIRNLFGYTLFFISTLSILILDLATSGKGGLGTFIGICVISGAFGIADAHTQGGMVGDLSYMLPEFIQSFLAGLAASGALTSALRLITKAAFENSKNGLRKGAIMFFAISTFFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQIPSGRANQYEKEIDRKGNKKLLLENIDYALDLFLIYALTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVCDLIGRYIPLLKFLKLESRKKLTTAIVSRLLFVPAFYFTAKYGTQGWMIMLTSFLGLSNGYFTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWFWLIGKGW*	440

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso12g0869	439	Pfam	Nucleoside transporter	148	433	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	PIRSF	ENT	11	437	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	175	195	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	295	312	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	351	368	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	425	439	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	PANTHER	EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2	26	438	IPR030200	-
	Gso12g0869	439	PANTHER	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	26	438	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gso12g0869	439	SUPERFAMILY	MFS general substrate transporter	34	432	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso12g0869	Gso-Chr12	9690070	9693746	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso12g0869	28	437	Organic Solute Cotransporters	AT4G05120	69.756	0.0	595

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso12g0869	K15014		-	gmx:100784933	849.351

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso12g0869	12	9690070	9693746	Gso12g0869	12	9690070	9693746	ECH
	Gso12g0869	12	9690070	9693746	Gso6g2462	6	46281734	46282459	GST
	Gso11g3180	11	47577983	47582613	Gso12g0869	12	9690070	9693746	PCT
	Gso12g0869	12	9690070	9693746	Gso11g3180	11	47577983	47582613	PCT