Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3180 ATGGTCAACAGTGAGGTTTCTACACGTCTTGAGGGAAAATATGCTGCAATTGTGGTGTGCTGGCTTCTTGGCAATGGATGTCTTTTCTCGTGGAACAGTATGCTGACAATAGAAGATTACTACGGTTACTTGTTTCCGAAATACCACCCCTCTAGGGTGCTTACTCTTGTATATCAGCCATTTGCATTTGGAACACTTGCGATACTGGCATATAATGAGGCCAAACTCAATACTCGACTAAGGAATCTGTTTGGATATATACTTTTTTTCATAAGCACTTTGTTGGTGTTAATTTTGAATTCAGCAACATCTGGTAAAGGAGGACTTGGAACTTTCATCGGTATATGCGCACTTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTCTCCTACATGAAACCAGAATTCATTCAATCTTTCCTTGCTGGTTTGGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGTTGGTTACAAAAGCAGCATTTGAGAATTCTAAGGACGGTCTCCGCAAAGGAGCCATTCTGTTCTTTGCCATATCAACATTCTTTGAGCTTCTTTGTGTTGTTCTCTATGCATTTATTTTCCCTAAAATACCAATTGTGAAGTACTACCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGACCTTGCAGCTGGTGGCATCCGGACATTACCTGGAACAGAGAAGGAATATACGAAAGATCCAGAGAGGAAGGGAAACAAGCAATTGTTATTAGAAAATATTGACTATGCACTTGACACGTTCCTAATTTATATGCTAACACTGTCTATTTTCCCTGGATTCCTCTTAGAAGATACTGGATCACATAGTTTAGGCACCTGGTATGCTCTTGTTTTAATTGCTATGTATAATGTGTGGGATCTGATTGGAAGATACATTCCACTCTTGAAATGCTTGAAGTTGGAGTCCCGAAAGTTGATCACTATAACAATTCTTAGCCGTTTCTTACTTGTTCCAGCATTTTATTTCACTGCTAAGTATGGTGACCAAGGGTGGATGATAGTGTTAACGTCCTTCTTGGGGCTATCCAATGGTTACCTCACTGTCTGTGTTCTAACATCTGCACCCAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTGTGGTTAATAGGTAAAGGATGGTGA 1245 0.4137 MVNSEVSTRLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHPSRVLTLVYQPFAFGTLAILAYNEAKLNTRLRNLFGYILFFISTLLVLILNSATSGKGGLGTFIGICALSGAFGVADAHVQGGMVGDLSYMKPEFIQSFLAGLAASGALTSALRLVTKAAFENSKDGLRKGAILFFAISTFFELLCVVLYAFIFPKIPIVKYYRSKAASEGSKTVSADLAAGGIRTLPGTEKEYTKDPERKGNKQLLLENIDYALDTFLIYMLTLSIFPGFLLEDTGSHSLGTWYALVLIAMYNVWDLIGRYIPLLKCLKLESRKLITITILSRFLLVPAFYFTAKYGDQGWMIVLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3180 414 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 3 413 IPR030200 -
Gso11g3180 414 PIRSF ENT 3 412 IPR002259 GO:0005337|GO:0016021|GO:1901642
Gso11g3180 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 3 413 IPR002259 GO:0005337|GO:0016021|GO:1901642
Gso11g3180 414 Pfam Nucleoside transporter 124 408 IPR002259 GO:0005337|GO:0016021|GO:1901642
Gso11g3180 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 122 144 IPR002259 GO:0005337|GO:0016021|GO:1901642
Gso11g3180 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 150 170 IPR002259 GO:0005337|GO:0016021|GO:1901642
Gso11g3180 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 349 365 IPR002259 GO:0005337|GO:0016021|GO:1901642
Gso11g3180 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 386 410 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3180 Gso-Chr11 47577983 47582613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3180 3 412 Organic Solute Cotransporters AT4G05120 70.244 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3180 K15014 - gmx:100798899 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3180 11 47577983 47582613 Gso12g0869 12 9690070 9693746 PCT
Gso11g3180 11 47577983 47582613 Gso6g2462 6 46281734 46282459 PCT
Gso12g0869 12 9690070 9693746 Gso11g3180 11 47577983 47582613 PCT
Gso6g2462 6 46281734 46282459 Gso11g3180 11 47577983 47582613 PCT