Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0837 ATGGCCCTAGACAGCAGTTCCATGTTGCTAAATTTTTCCTTCACCCCACCACTTGTTAGTTTCAGCAAACATCAAAAACAACGAGGGATTAATCTTCTAGTGCGTAGAATTGGTTCCACCAGCCAGTATTACTGCTTGGCAACAAGCACAAACGTTCGTGAAAGAAAATCAGCCAATTACCAGCCTAACCTCTGGAATTATGATTTTTTGCAGTCATTGAAGAATGACTATGCGGATGTAAAATATGAGATAATGGCCAGGAAGCTGGAGGAAGTGAGGAGAATGATAAAGGATGAAAATTCAGAAATATGGGTCACACTAGATCTGATTGACAATGTGAAACGCCTGGGCCTCAGCTATCACTTTGACAAGGAGATAAGAGAAGCCCTTCATAGGTTTCTCTCTTTAGAAAGATGTAATGCCACAAATATTCACACAAGCCTGCATGAGACTGCTTTAAGCTTCAGGCTCCTTAGAGAATATGGTGATGATGTTTCAGCAGATGTATTTGAGAGGTTTGAGGACAACAACGGTAATTTCAAGGCAAGCCTTAGCAGAGATATGAAGGGAATGTTGAGTCTGTACGAGGCATCGTTTCTCAGTTATGAAGAAGAACTGATTCTGGATAAGACCAAGGCCTTCAGTAGCTTCCATCTAAGGGGTGCCCTCAAAGAAGGTAGAAGCAATAGTATGCTCTTAGAACAAGTGAATCATGCATTGGAGCTTCCACTGCATCACAGAATCCAAAGGCTTGAAGCCAGGTGGTATATTGAATCTTATGCTAAAAGAAAGGATGCAAATTGGGTGCTGCTTGAAGCAGCAAAACTAGATTTCAACATTGTGCAGTCAACACTGCAAAAGGACCTCCAAGAAATGTCAAGGTGGTGGAAACGGATGGGACTAGCTCCAAAGTTAAGCTTTAGCCGGGACAGGCTAATGGAGTGTTTCTTTTGGAGCATGGGAATGGCATTCGAGCCTCAGTTCAGTGATCTTCGCAAAGGTTTAACCAAAGTCACTTCTCTAATAACTACAATTGACGACGTTTATGATGTTTATGGCTCCTTGGATGAGCTAGAACTTTTCACAAAAGCCGTTGAAAGTTGGGATATTAAAGCTGTTCAAGTTATGCCGGAGTATATGAAGATATGTTTCCTTGCTCTCTACAACACTGTCAACGAATTCGCTTATGATGCCCTTAAAATCAAAGGACAAAATATCCTTCCCCATCTTACCAAGGCGTGGTCGGTTATGTTGAAAGCATTCTTGCAAGAAGCCAAGTGGTGCCGGGATAAATATTTGCCACCATTTGAAGACTATCTCAACAATGCATGGGTGTCTGTGTCTGGAGTAGTGATACTGACCCATGCCTATTTCTTGTTGAATGATAACATCACTAAGGATGCACTTGATTCCTTGGACAATTATCATGATCTTTTGCGTAGGCCATCCATTATTTTTCGACTTTGCAATGATTTGGGTACTTCAAGGGCTGAGTTACAAAGAGGTGAAGCAGCAAGCTCGATCGTGTGTAACATGCGTGAAAGTTGTGTAACTGAGGAGGGTGCTTACAAAAACATACACAGTTTGCTTGATGAAACTTGGAAGAAGATGAACAAAGATCGAGCCATGCATTCTCCTTTTTCAAAACCATTTGTGGAAGCAGCAATCAACCTTGCTAGAATCTCTCACTGCACATACCTTAATGGAGATGGCCATGGTGCCCCAGATATTGCAGCCAAGAATCGGATTCGGTCCTTGATAATTGAACCCATCCCACTTAGGGAGATAAATGCGGATATTGTTCAGCTTGAGGTCTTTGACCACGAGCAGTTTAACAATTGGGTGGAGAAGGGTGTAGCTCCAGCCATTGAACCCTGTTTAAAGCTCTATGAAGATGTTTTGAATCTGGGATTCAAGGTTATTCTACTGACAGGACGGAGTGAAAGGCACAGGAGTGTCACTGTTGATAATTTGATCAATGCTGGGTTTAAGGAATGGGACCAGCTCATACTAAGGTAA 2019 0.422 MALDSSSMLLNFSFTPPLVSFSKHQKQRGINLLVRRIGSTSQYYCLATSTNVRERKSANYQPNLWNYDFLQSLKNDYADVKYEIMARKLEEVRRMIKDENSEIWVTLDLIDNVKRLGLSYHFDKEIREALHRFLSLERCNATNIHTSLHETALSFRLLREYGDDVSADVFERFEDNNGNFKASLSRDMKGMLSLYEASFLSYEEELILDKTKAFSSFHLRGALKEGRSNSMLLEQVNHALELPLHHRIQRLEARWYIESYAKRKDANWVLLEAAKLDFNIVQSTLQKDLQEMSRWWKRMGLAPKLSFSRDRLMECFFWSMGMAFEPQFSDLRKGLTKVTSLITTIDDVYDVYGSLDELELFTKAVESWDIKAVQVMPEYMKICFLALYNTVNEFAYDALKIKGQNILPHLTKAWSVMLKAFLQEAKWCRDKYLPPFEDYLNNAWVSVSGVVILTHAYFLLNDNITKDALDSLDNYHDLLRRPSIIFRLCNDLGTSRAELQRGEAASSIVCNMRESCVTEEGAYKNIHSLLDETWKKMNKDRAMHSPFSKPFVEAAINLARISHCTYLNGDGHGAPDIAAKNRIRSLIIEPIPLREINADIVQLEVFDHEQFNNWVEKGVAPAIEPCLKLYEDVLNLGFKVILLTGRSERHRSVTVDNLINAGFKEWDQLILR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0837 672 Pfam Terpene synthase family, metal binding domain 271 536 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso12g0837 672 Gene3D Farnesyl Diphosphate Synthase 62 581 IPR008949 -
Gso12g0837 672 PANTHER TERPENE SYNTHASE 12-RELATED 42 592 - -
Gso12g0837 672 CDD Terpene_cyclase_plant_C1 55 590 IPR044814 GO:0010333|GO:0016102
Gso12g0837 672 Gene3D - 101 266 IPR036965 GO:0010333|GO:0016829
Gso12g0837 672 Pfam Terpene synthase, N-terminal domain 65 240 IPR001906 GO:0010333|GO:0016829
Gso12g0837 672 Gene3D - 594 672 IPR023214 -
Gso12g0837 672 SFLD Terpene Cyclase Like 1 C Terminal Domain 267 592 IPR034741 -
Gso12g0837 672 PANTHER OS04G0344100 PROTEIN-RELATED 42 592 - -
Gso12g0837 672 Coils Coil 82 102 - -
Gso12g0837 672 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 601 672 IPR005519 -
Gso12g0837 672 SUPERFAMILY Terpenoid synthases 267 591 IPR008949 -
Gso12g0837 672 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 61 265 IPR008930 -
Gso12g0837 672 SFLD Isoprenoid Synthase Type I 267 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0837 Gso-Chr12 9058537 9066093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0837 K12742 K19968 gmx:100814880 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0837 12 9058537 9066093 Gso12g0837 12 9058537 9066093 ECH
Gso11g3196 11 47756254 47760847 Gso12g0837 12 9058537 9066093 PCT