Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0778 ATGGGGAAGAAGCAGAACGAGATCCAGAAAACGGGGCTAGGTCGAGCCCTGGTGAAGCAGCACAACCAGATGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAGGAAGAAGTTCCTTGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCGTCGAGCAATCCCTAGAACCCCTCCCCGAACTTGCCGCTGCCGCTTCAACCACTCTCATCAGCCTTGAACCAGGTTCCGTGCCCGATGAAACGACGACGCCGGAAGAAGCGAGGAAGCAGCAGAAGCAAGAGGAGGCGCTCCACGCCAGCAGCCTCCGCGTTCCTCGCCGCCCGCCGTGGACTCCCGACATGTCCGCCGACGAGCTGAACGCCAGCGAAACCCAAGCTTTCTTGACCTGGCGCCGCAGCTTGGCGAGGCTTGAGGAGAATAAGAAGCTTGTTCTTACTCCGTTTGAGAAGAATCTTGACATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATCTGCTTGTTATGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAACGTACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGCTTCTATCAGAGAGAAATGGGCCGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCGGCTAAAGCTGCTACTGCTGCCTTGGAAGGCAAAAAACTTGGTTCATCATGGGAGGATGATAACATGGGGAGAACTAATAGCCCAGACACAAAGATATATGGAAGGGATGAACTTTTGGCCCGCTTGCAATCTGAGGCAGAAGAGATAGTTGACAGAAGGAGAAATTCTGGCTCCTCTGAGGCAGGACCATCTAACATTAAATCCCCTGCTGAAAATACTGCTGGTAGTTCATCATCGAGCAATGTTGTTGTGGGATTTGTTGGATATCCTAACGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGCACTGGTGTCACCTCTACCCCAGGGAAAACAAAGCACTTTCAGACATTAATTATCTCTGATGAGCTGACCCTTTGTGATTGTCCTGGATTAGTTTTTCCATCCTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTACCTATTGATAGGATGACTGAACAAAGGGAATCTGTCCAAGTTGTTGCTGATAGAGTCCCGAGACATGTCATTGAGGAGATTTATAAGATAAGGCTTCCTAAACCTAAGTCATATGAGTCCCAATCGCGCCCCCCTCTAGCATCTGAACTTTTGAGAGCATACTGTACTTCTCGTGGGTATGTTGCCTCTAGTGGACTCCCTGATGAAACCAGGGCTGCCCGTCAGATGTTGAAAGATTACATTGATGGGAAGCTGCCTCACTATCAAATGCCTCCCGGAGCGTCAGATGAGGAACAAGCTTTGGAAGAACCTGCTGGACATGACTCGGTTGACTTGGATGCATCGGATTCATCTGCTATTGAAGATGCTTCAGATGTTGAGAGCGAACTTGCACCAAATCTTGAACATGTATTGGTTGACCTCAATTCATTTGACATGGCTAATGGACTTGCTCCAAAAAATACTACTACTGTTAAGAAGCCTAAGGCATCTCATAAGCACCACCATAAAAAGCCACAGAGGAAAAAAGATCGTTCTTGGAGAGCAGGAAAAGCAGGAAACGAGGATGCTGATGGGATGCCAGTTGCAAGATTCTTTCAGAAACCAGCAAATACAGGTCCTCTGAAGGTTGGGTAA 1797 0.4808 MGKKQNEIQKTGLGRALVKQHNQMIQQSKDKSRFYRKKFLESFTEVSDIDAVVEQSLEPLPELAAAASTTLISLEPGSVPDETTTPEEARKQQKQEEALHASSLRVPRRPPWTPDMSADELNASETQAFLTWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDELLARLQSEAEEIVDRRRNSGSSEAGPSNIKSPAENTAGSSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEQRESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELLRAYCTSRGYVASSGLPDETRAARQMLKDYIDGKLPHYQMPPGASDEEQALEEPAGHDSVDLDASDSSAIEDASDVESELAPNLEHVLVDLNSFDMANGLAPKNTTTVKKPKASHKHHHKKPQRKKDRSWRAGKAGNEDADGMPVARFFQKPANTGPLKVG* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0778 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 447 IPR027417 -
Gso12g0778 598 Pfam 50S ribosome-binding GTPase 317 373 IPR006073 GO:0005525
Gso12g0778 598 Gene3D - 156 373 IPR027417 -
Gso12g0778 598 MobiDBLite consensus disorder prediction 281 312 - -
Gso12g0778 598 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 372 IPR030378 GO:0005525
Gso12g0778 598 MobiDBLite consensus disorder prediction 546 565 - -
Gso12g0778 598 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 9 562 IPR043358 GO:0003924
Gso12g0778 598 MobiDBLite consensus disorder prediction 84 103 - -
Gso12g0778 598 MobiDBLite consensus disorder prediction 75 118 - -
Gso12g0778 598 MobiDBLite consensus disorder prediction 471 506 - -
Gso12g0778 598 Gene3D - 375 478 IPR023179 -
Gso12g0778 598 MobiDBLite consensus disorder prediction 537 598 - -
Gso12g0778 598 MobiDBLite consensus disorder prediction 290 312 - -
Gso12g0778 598 PANTHER GTPASE LSG1-1 9 562 - -
Gso12g0778 598 PRINTS GTP1/OBG GTP-binding protein family signature 317 337 IPR006073 GO:0005525
Gso12g0778 598 PRINTS GTP1/OBG GTP-binding protein family signature 363 378 IPR006073 GO:0005525
Gso12g0778 598 CDD HSR1_MMR1 156 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0778 Gso-Chr12 8047998 8052105 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0778 K14539 - gmx:100817523 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0778 12 8047998 8052105 Gso11g1331 11 14715316 14719473 GST