Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1331 ATGGGAAAGAAGCAGAACGAGAGTCAGAAAACAGGGCTAGGTCGAGCCCTGGTGAGGCAGCACAACCAAATGATCCAACAGAGCAAGGACAAGTCTCACTTCTACAAGAAGAAGTTTCTCGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCGTCGAGCAATCCCTCGAACCCATCCCCGAACTCGCCGCCGCATCAACCACCCTAATCAGCCTCGATCCAGATTTTGTGCCCGGTGAAGCGACGACGCCGGAAGAAGCGAGGAAGCAGCAGAAGCAAGAGGAGGCGCTCCACGCCAGCAGCCTCCGCGTTCCTCGCCGCCCGCCATGGACTCCCGACATGTCCGCCGACGAGCTGAACGCCAGCGAAACACAAGCTTTCTTGACTTGGCGCCGCAGCTTGGCGAGGCTCGAGGAGAATAAGAAGCTTGTTCTTACTCCGTTTGAGAAGAATCTTGACATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATCTGCTTGTTATGGTTGTTGATTCACGAGATCCGTTGTTCTATCGTTGTCCAGACCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGTTTCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCGGCTAAAGCTGCTACTGCTGCCTTGGAAGGCAAAAAACTTGGTTCATCATGGGAGGATGATAACATGGGGAGAACTAATAGCCCAGACACAAAGATATATGGAAGGGATGAACTTTTGGCCCGCTTGCAATCAGAGGCAGAAGAGATAGTTGACAGGAGAAGAAATTCAGGCTCCTCTGATGCAGGACCATCTAATATTAAATCCCCTGCTGAAAATACTGCTGGTAGTTCATCATCGAGTAATGTAATTGTGGGATTTGTTGGATATCCTAACGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGCACTGGTGTCACCTCTACCCCAGGGAAAACAAAGCACTTTCAGACATTAATTATCTCGGATGAGCTGATCCTCTGTGATTGTCCTGGATTAGTTTTTCCATCCTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTACCTATTGATAGGTTGTCTGAACACAGAGAATCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATCGAGGAGATTTATAAGATAAGGCTTCCTAAACCTAAGTCATATGAGTCCCAATCGCGCCCTCCTTTAGCATCTGAACTTTTGAGAGCATATTGTACTTCTCGAGGGTATGTTGCCTCTAGTGGACTCCCTGATGAAACCAGGGCTGCCCGTCTGATGTTGAAAGATTACACTGATGGGAAGCTGCCTCACTATCAAAAGCCTCCCGGAGCATCAGATGAGGAACAAGCTTTGGAAGAACCTGCGGGACATGACTTGGTTGACTTGGATGCATCAGATTCATCTGGTACTGAAGAGTCTTCAGATGACAAGAGTGAACTTGCACCAAATCTTGAACATGTATTGGATGATCTCAATTCATTTGACATGGCTAATGGACTTGCTCCAAAGAATATTACTACTGTTAAGAAGCCTAAGGCATCTCATAAGCACCACCATAAAAAGCCACAGAGGACAAAAAATCGTTCTTGGAGAGCAGGAAACGAGGATGCTGATGGGATGCCAGTTGCAAGATTCTTTCAGAAAGCAGCAAATACAGGTCCTATGAAGGCTGGGTAA 1785 0.4717 MGKKQNESQKTGLGRALVRQHNQMIQQSKDKSHFYKKKFLESFTEVSDIDAVVEQSLEPIPELAAASTTLISLDPDFVPGEATTPEEARKQQKQEEALHASSLRVPRRPPWTPDMSADELNASETQAFLTWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPVSIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDELLARLQSEAEEIVDRRRNSGSSDAGPSNIKSPAENTAGSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSRYEMIACGVLPIDRLSEHRESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELLRAYCTSRGYVASSGLPDETRAARLMLKDYTDGKLPHYQKPPGASDEEQALEEPAGHDLVDLDASDSSGTEESSDDKSELAPNLEHVLDDLNSFDMANGLAPKNITTVKKPKASHKHHHKKPQRTKNRSWRAGNEDADGMPVARFFQKAANTGPMKAG* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1331 594 MobiDBLite consensus disorder prediction 542 575 - -
Gso11g1331 594 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 8 560 IPR043358 GO:0003924
Gso11g1331 594 MobiDBLite consensus disorder prediction 545 563 - -
Gso11g1331 594 MobiDBLite consensus disorder prediction 281 311 - -
Gso11g1331 594 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 156 371 IPR030378 GO:0005525
Gso11g1331 594 PANTHER GTPASE LSG1-1 8 560 - -
Gso11g1331 594 MobiDBLite consensus disorder prediction 86 102 - -
Gso11g1331 594 MobiDBLite consensus disorder prediction 289 311 - -
Gso11g1331 594 CDD HSR1_MMR1 155 371 - -
Gso11g1331 594 Gene3D - 374 475 IPR023179 -
Gso11g1331 594 Pfam 50S ribosome-binding GTPase 316 372 IPR006073 GO:0005525
Gso11g1331 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 451 IPR027417 -
Gso11g1331 594 MobiDBLite consensus disorder prediction 78 117 - -
Gso11g1331 594 PRINTS GTP1/OBG GTP-binding protein family signature 316 336 IPR006073 GO:0005525
Gso11g1331 594 PRINTS GTP1/OBG GTP-binding protein family signature 362 377 IPR006073 GO:0005525
Gso11g1331 594 Gene3D - 155 372 IPR027417 -
Gso11g1331 594 MobiDBLite consensus disorder prediction 495 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1331 Gso-Chr11 14715316 14719473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1331 K14539 - gmx:100815023 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1331 11 14715316 14719473 Gso11g1331 11 14715316 14719473 ECH
Gso12g0778 12 8047998 8052105 Gso11g1331 11 14715316 14719473 GST