Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0763 ATGGGTGTGCCATCGTTCTATAGATGGCTGGTTAACAAATATCCCAAGGTGGTGCAAGACGTGGTGGACCCCACCATGCAAGAAGACCCAAATGGAGTGAAGTTTGATAACTTGTATCTTGACATGAATGCCATCATCCACCCATGTTTTCACCCTGATGATCATGACAAAATTCCATTTCCTACCACATTTGAAGATGTGTTCAGGAATGTGTTTGACTACATTGATCGGCTTGTTGAAACTGTTAGACCTGGGAAGCTCCTTTACATGGCTATTGACGGGGTTGCACCACGTGCCAAAATGAATCAACAACGATCAAGGCGCTTTCGAGCTGCAAAGGACAATGAAATTCAAGAAGCTGAGGAAGAGAGGCTGAGGAAACAATTCGAAACGGAAGGGAAACAAGTTCTTCCTAAACAAGAATCTGATGTGTCAGATTCAAATATCATAACACCTGGCACTGAATTCATGCATGAACTCTCTAAGGCCCTTAAAAGCTATATCTCTGCAAGGATAACCTCTAACCCATTATGGAAGGATATTATGGTAATTCTCTCTGATGCTAATGTTCCCGGAGAAGGTGAACATAAGATTATGTCATACATAAGAAAACAGCGTAGTCTTGAGGGATATGATCCAAACACCAGTCACTGCTTATATGGCTCGGATGCTGATCTCATTATGCTGGCAATGGCAACTCATGAGCCCCATTTTTCAATATTAAGAGAGGATATCCTTATTCAGCATCAGCACCCAAAAATTGATGCTAAGCCTTTCAAGTTTTTGCACATTTGGTTATTGAGGGAGTATCTAGGGACAGACATGAAGATAGAAGATCCTCCTAAGAATTGCAGCATTGAGTTTGAGAGGATAATTGATGATTTCATCTTCATTTGCTTTTTCGCTGGAAATGATTTTCTGCCCCACATGCCAACTTTGGAAATTCACGAGGGGGCTATTGATTTGCTAATGAATGTTTACAAGAAAGAATTCAATAAACTTGGAGGATATCTTGTGGACATGAGCAGGATTGGGGAGGAACATGCTGCTTTTTTGAAGTTATCTAGAGTTGAAAAATTTATACTTGCTGTTGGTGCATATGAAGAGAAAATCTTTAAGAAAAGATCTGAAACACGAGAAAGATATCTGCGAAGGCTTATTAGAGATAATGAGGATGCTAAGCGGGAAGAAGTGAATGCAGCATGTTACTCCGATCTTGATGATGAAAATACTTCTGATTGTACTCTTCTGATTAAGAAGGCACCAGATTCAAAAACTTTGTCTGTTTTGGTCAACAATGTTTCAGCTACACATGCTGAAATTGAGCAGAACACAAAGGATTTAAAAAATGAATTGAAGAGATGTATTAGAGAGAAATGTGACTTGTTTAAGAGCGGGGATTTCCTAATAGACAAGGTCCAGAAGTACACGGAAGGTTTGGTGTGGGTTCTCCAATACTATTTTTCATCAGTTGCTTCGTGGACATGGTTTTATCCATTTCACTATGGTCCATTTGCTTCGGACTTAAAGGGCATGGGTCAGGTGAGAGTAAAATTTGAAAAAGGTGTCCCATTTTTACCACTTGATCAACTTTTAAGTGTTCTCCCCCCGGCAAGTTCTCATGCACTTCCAAAAGCCTATTCGCAATTGATGCTAGATGAGCAGTCTAGAATATTTGACTTTTATCCTCAAGATTTTGAAGTTGACACGGAAGGAAAGCGCTTCATGTGGCAGGGAATCTGCATACTTTCATGGATTGATGATAAACGGCTTGTGGCTGAAACCAGAGAACTCAAAAATGAATTATCTGAAAATGAGGCCATAAGAAATTCAGTCAAAGCTGATAGCTTGTTTGTTAGAAGCGCTAGCAAATTAGCAGAGAAATTTGGCTCTCTTTCTCTAGACACAAACCTGCCTTGCAAATTAGAAACAAGAATGAGCAGTGACGGCATTGGGGGTATCCTAAGTCTTTGTGACGAGTTCGTTGAGAAGCCTTGCTTGGACATTTGTGACAACAAAAAAAAAGATAGTGTCTTATGTGTCTATTACGAGCTTCCTGCTGGTAGTAATCATATTCCTGGTTTACTATCGGATGTGAAGCTTCCAGAGAAGACAATCTTTGAAAGTGACATTATGGAAACAGAACTCTGGCATGAATGTCAGAAATATTATAGTCGTTTTGAGAGGGTGCAAAATCAAGACAATTGGAGGAGTGAAAACACAAGCAATACTTCAAGGTTTGCCTCAAATGCAATTAGCCAACGTACAAGAATCTTTTCATCAAACACACCTTTATTCACTTTCCAAGGTGCTGGTGTCGGATGGGGTTCGGGTAGAGGGAAAAGAATTGATGCAATGGCAAGTGAGAGTGTGCCAAACAACACAAAACCACAGCACTTTGTGGACAACTTTAGACAACTCAGAATATCAGAGTCTAATAATCATTTTCTGAGGCCTGGTGGTGGCAGTTCTCTGTTTCGACCACATAACAAGGGTCACACGAATCAGTCAAGAAATGCTCCTTATCATCAAGGCTCACCATCTAATAATGGTTACATTAATCAGCCAAGAAATGCTCCTTATCATCAAGGCTCACAGTATAATAATGGTTACATGAATCAGTCCAAAACTGCTCCTAATCATCAAGGGTCACAATATGTGACTGTGCCTAATTTTGGTCGAGGACAAGGTAGGGGTGCATCTAGTAACAGTTCATTGCGGCCTCAATGGAGTGGTGGAAAAGCTTATCAAGTGAAAGATCAAGATCGTTGGTAA 2775 0.4025 MGVPSFYRWLVNKYPKVVQDVVDPTMQEDPNGVKFDNLYLDMNAIIHPCFHPDDHDKIPFPTTFEDVFRNVFDYIDRLVETVRPGKLLYMAIDGVAPRAKMNQQRSRRFRAAKDNEIQEAEEERLRKQFETEGKQVLPKQESDVSDSNIITPGTEFMHELSKALKSYISARITSNPLWKDIMVILSDANVPGEGEHKIMSYIRKQRSLEGYDPNTSHCLYGSDADLIMLAMATHEPHFSILREDILIQHQHPKIDAKPFKFLHIWLLREYLGTDMKIEDPPKNCSIEFERIIDDFIFICFFAGNDFLPHMPTLEIHEGAIDLLMNVYKKEFNKLGGYLVDMSRIGEEHAAFLKLSRVEKFILAVGAYEEKIFKKRSETRERYLRRLIRDNEDAKREEVNAACYSDLDDENTSDCTLLIKKAPDSKTLSVLVNNVSATHAEIEQNTKDLKNELKRCIREKCDLFKSGDFLIDKVQKYTEGLVWVLQYYFSSVASWTWFYPFHYGPFASDLKGMGQVRVKFEKGVPFLPLDQLLSVLPPASSHALPKAYSQLMLDEQSRIFDFYPQDFEVDTEGKRFMWQGICILSWIDDKRLVAETRELKNELSENEAIRNSVKADSLFVRSASKLAEKFGSLSLDTNLPCKLETRMSSDGIGGILSLCDEFVEKPCLDICDNKKKDSVLCVYYELPAGSNHIPGLLSDVKLPEKTIFESDIMETELWHECQKYYSRFERVQNQDNWRSENTSNTSRFASNAISQRTRIFSSNTPLFTFQGAGVGWGSGRGKRIDAMASESVPNNTKPQHFVDNFRQLRISESNNHFLRPGGGSSLFRPHNKGHTNQSRNAPYHQGSPSNNGYINQPRNAPYHQGSQYNNGYMNQSKTAPNHQGSQYVTVPNFGRGQGRGASSNSSLRPQWSGGKAYQVKDQDRW* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0763 924 Gene3D - 516 612 - -
Gso12g0763 924 PIRSF Exonuclease_Xrn2 457 915 IPR017151 GO:0004534|GO:0005634|GO:0006139
Gso12g0763 924 PIRSF Exonuclease_Xrn2 1 256 IPR017151 GO:0004534|GO:0005634|GO:0006139
Gso12g0763 924 PIRSF Exonuclease_Xrn2 248 465 IPR017151 GO:0004534|GO:0005634|GO:0006139
Gso12g0763 924 Gene3D - 1 136 - -
Gso12g0763 924 Gene3D - 144 333 - -
Gso12g0763 924 Pfam XRN 5'-3' exonuclease N-terminus 1 244 IPR004859 GO:0003676|GO:0004527
Gso12g0763 924 CDD PIN_XRN1-2-like 38 271 - -
Gso12g0763 924 PANTHER 5'->3' EXORIBONUCLEASE 1 744 IPR027073 -
Gso12g0763 924 MobiDBLite consensus disorder prediction 828 911 - -
Gso12g0763 924 PANTHER OS11G0157000 PROTEIN 1 744 - -
Gso12g0763 924 Pfam Xrn1 helical domain 286 711 IPR041412 -
Gso12g0763 924 MobiDBLite consensus disorder prediction 813 924 - -
Gso12g0763 924 Coils Coil 431 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0763 Gso-Chr12 7674875 7682677 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0763 - - gsj:114379404 1865.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0763 12 7674875 7682677 Gso11g1349 11 15216841 15223101 GST