Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1349 ATGAAAAGGAAACAAGTTCTTCCTAAACAGCAATCTGATGTGTCAGATTCAAATATCATAACACCTGGCACTGAGTTCATGCATGAACTATCTAAGGCCCTTAAAAGCTACATCTCTTCAAGGATAACCTCTAACTCATTATGGAAGGATATTATGGTAATTCTTTCTGATGCTAATGTTTCTGGAGAAGGGGAACATAAGATTATGTCATACATAAGGAAACAGCTTAGTCTTGAGGGATACAATCCAAATACCAGTCACTGCTTATATGGCTCAGATGTTGATCTTATAATGCTGGCAATGGCAACTCATGAGCCCCATTTTTCAATATTAAGAGAGGATGTACCAATACAGCGGCAGCACTCAAAAGATGCCGCTAAGCCTTTCAAGGGGGCTATTGATTTGCTAATGACTGTTTACAAGAAAGAATTCAATAAACTTGGAGGATATCTTGTGGACATGAGCATGAGCAGAATTGGGGAGAAAAATGCTGCTTTCTTGAAGTTATCCAGACTTGAAAAATTTATACTTGCTGTTGGTGCATATGAAGAGAAAATCTTTAAGAAAAGATCTGAAATACGAGAAAAATATCTGCGAAGGTTTATTAGAGATAGTGAGGATGCTAAGCAGGACGAAGAAAATGCAACATGTTACTCAGATCTTGATGAAGAAAATACTTCTGATTGTACTCTTCTGATTAAGTCTGTTTTGGTCAACAATGTTTCAGCTACACATGCTGAATATCAGATTGAGCAGAACACAAAGGATTTGAAAGACGAATTGAAGATATGTATTAGAGAAAAATGTGACTTGTTTCAGAGCGGGAATTTCCTAACAGACAAGATAAAATTGGGAACAACTGGTTACAAAGAAAGATATTATAAAGCAAAGTTTTCTGTAGAGGGACCTACCGACATTGAGTGCAAAAGAAAAGAAATAGTGTGTGTTTCTTCACACAACTTTGCCAGCTGCTTTCATGTTTGGTTTTGTTCTTTTCCCTTCTCATTAGACATGCACTAG 1020 0.3676 MKRKQVLPKQQSDVSDSNIITPGTEFMHELSKALKSYISSRITSNSLWKDIMVILSDANVSGEGEHKIMSYIRKQLSLEGYNPNTSHCLYGSDVDLIMLAMATHEPHFSILREDVPIQRQHSKDAAKPFKGAIDLLMTVYKKEFNKLGGYLVDMSMSRIGEKNAAFLKLSRLEKFILAVGAYEEKIFKKRSEIREKYLRRFIRDSEDAKQDEENATCYSDLDEENTSDCTLLIKSVLVNNVSATHAEYQIEQNTKDLKDELKICIREKCDLFQSGNFLTDKIKLGTTGYKERYYKAKFSVEGPTDIECKRKEIVCVSSHNFASCFHVWFCSFPFSLDMH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1349 339 Pfam XRN 5'-3' exonuclease N-terminus 9 114 IPR004859 GO:0003676|GO:0004527
Gso11g1349 339 PANTHER OS11G0157000 PROTEIN 1 113 - -
Gso11g1349 339 PANTHER OS11G0157000 PROTEIN 130 316 - -
Gso11g1349 339 PANTHER 5'->3' EXORIBONUCLEASE 1 113 IPR027073 -
Gso11g1349 339 PANTHER 5'->3' EXORIBONUCLEASE 130 316 IPR027073 -
Gso11g1349 339 CDD PIN_XRN1-2-like 2 151 - -
Gso11g1349 339 Pfam Xrn1 helical domain 131 314 IPR041412 -
Gso11g1349 339 Gene3D - 8 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1349 Gso-Chr11 15216841 15223101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1349 - - gsj:114375534 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0763 12 7674875 7682677 Gso11g1349 11 15216841 15223101 GST