Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0746 ATGACTCGCGTTTTGGTTCAGAGGGGTTCTTCCGGTGGTGGTTCTTCGTCGAACCCGAACCGCAGTGGTGGTGGTGGTGGGTCTTCTTCTAATTCCTCGGTGCGAGCGGAGCCGCAGGTTCCGGTTTTGCCGGAGAATAGTGACGAGGTTGTTGTTGTGTCGGATGAGGTTTTGGAGAGTGGTGATAAGGGGAAGAGTGAGGAGGGTGTTCATTTTGAGCAGGGTGATGGGTCGTGTGAAGATGACGTGGCTGCTGTTGTTGAGAGTGATGTTAGGGAGGAGATTGTGAAGGGGTTGAGTGGGCTTAGAGTTGGTGAAAGAGTTGTTTCGGAGAGTGAGGGTTCGAGTGGGGATTCTTCTTCCCTCCTTGTTGGTGGTGGTTCGTGTCCCCCTCCACCTCCGGTGCCGCCTCCCAAGCCTTCCGTGACGGGGAACTTGAATTCGAGGAGGAGTGTGGCCGGGAGTTTGAATTCCGGCAGCGTCGGATCGTCGAGGAGGGCAGTTACGTGGCCGGTTGTTTCGGCTAGGACTTCACCTGCTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAACAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGGGAGCGACAGTTCGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTCAAAAAAATGATGGAGGATGGAAATTGTCTATTCCGAGCTGTTGCAGATCAGGTGTATGGGGATTCTGAAGTGTATGATTTGATCAGACAGATGTGCATAGATTATATGGAGCGAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGCTTCACATCTTACTGCAAGAGAAAGAGAAGAGACAAGGTCTATGGAAATAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGTCCAATTCACATATACTCCTACACCACAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACATGCCACCAATACGATTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGATCCACGGCGCTTGACAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAAGCTCAACAAGACAAACAGATCAATAATGCACTGTTAGCCGAGGGTCGGTTTTACTCTGATCTCGAGCTCACAGAAAAGGAAATTGAACGCATGGTGATTGAAGTTTCTCGAGCTGAGTACCTTGCAGATAGTACATTTAAGCAACAGCTTGGAGACAGAGAGTCCTCTACCTCAAACGCAGAACCATCATCTTCTGGAGCAACCGGTTCATCTGGCACTGATCGCAAGACGGAACATGGGAAAGAGCATGGTTCTGATCTTAGTAGCGGTATGCAGATGTTACTATCAATGGGATTCAGTTACATGCAAGCGATTGAGGCTTACAGCATATTTGGGGACGATGTTGATTCCATGGTTTGTTACCTGTTAGAAACTGGCAGTAGCAGCAGACGTAAAGGCAAGGCCACTGAATGA 1557 0.4759 MTRVLVQRGSSGGGSSSNPNRSGGGGGSSSNSSVRAEPQVPVLPENSDEVVVVSDEVLESGDKGKSEEGVHFEQGDGSCEDDVAAVVESDVREEIVKGLSGLRVGERVVSESEGSSGDSSSLLVGGGSCPPPPPVPPPKPSVTGNLNSRRSVAGSLNSGSVGSSRRAVTWPVVSARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSEVYDLIRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYTTEPINIFHGSYNTDMPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKAQQDKQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLADSTFKQQLGDRESSTSNAEPSSSGATGSSGTDRKTEHGKEHGSDLSSGMQMLLSMGFSYMQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0746 518 PANTHER OTU DOMAIN CONTAINING PROTEIN 118 482 - -
Gso12g0746 518 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 118 482 - -
Gso12g0746 518 Pfam OTU-like cysteine protease 237 346 IPR003323 -
Gso12g0746 518 MobiDBLite consensus disorder prediction 429 454 - -
Gso12g0746 518 MobiDBLite consensus disorder prediction 1 79 - -
Gso12g0746 518 ProSiteProfiles OTU domain profile. 229 352 IPR003323 -
Gso12g0746 518 MobiDBLite consensus disorder prediction 1 37 - -
Gso12g0746 518 SUPERFAMILY UBA-like 469 505 IPR009060 GO:0005515
Gso12g0746 518 MobiDBLite consensus disorder prediction 99 201 - -
Gso12g0746 518 MobiDBLite consensus disorder prediction 427 469 - -
Gso12g0746 518 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 465 506 IPR015940 -
Gso12g0746 518 MobiDBLite consensus disorder prediction 127 141 - -
Gso12g0746 518 Gene3D - 211 362 - -
Gso12g0746 518 MobiDBLite consensus disorder prediction 56 78 - -
Gso12g0746 518 SUPERFAMILY Cysteine proteinases 216 352 IPR038765 -
Gso12g0746 518 MobiDBLite consensus disorder prediction 142 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0746 Gso-Chr12 7519235 7524937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0746 K12655 - gmx:100809162 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0746 12 7519235 7524937 Gso11g1370 11 15587150 15597060 GST