LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g1370	ATGACTCGCGTTTTGGTTCAGAGGGGTTCTTCCGGTGGTGGTTCGACTTCGTCCAACCCGAACCGGAGTGGTGGTGGGTCTTCTTCTAATTCCTCGGCGCGGGCGGAGCCGCAGGTTCCGGTTTTGCCGGTGAATAGCGACGAGGTTGTTGTTGGTGTTGTGTCGGATGAGGTTTTAGAGAGTGGTGATAAGGGAAAAAGTGACGAGAGTGTTCATTTTGAGCAGGGTGATGGATCGTGTGACGATGGCGTGGCTGCTGCTGTTGTTGTTGAGAGTGATGTTAGGGAGGAGATTGTGAAGGGGTTGAGTGGGCTTAGAGTTGGTGAAAGGGTTGTTTCGGAGAGTGAGGTTTCGAGTGGGGATTCTTCTTCCCTCCTTGTTGGTGGTGGTGGTTCGTGTCCCCCGCCGCCTCCTGTGCCGCCTCCCAAGCCTTCCGTGACGGGGAACTTGAATCCGAGGAGGAGTGTGTCCGGGAGTTTGAATTCCGGCAGTGTGGGATCCTCGAGGAGGGCGTGGCCGGTTGTTTCGGCTAGGACTTCGCCTGTTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAACAGTGCTGATGAGCAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTCAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGACTCTGAAGTGTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGCGAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGCTTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGTCCAATTCACATATACTCCTACACGACAGAACCTATCAATATCTTTCATGGAAGTTACAACACTGACACGCCACCAATACGATTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGATCCACGGCGCTTGACAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATAAAGTCAAGGCTGCTATTAAAGCTCAACAAGACCAACAGATCAATAATGCCCTGTTAGCCGAGGGTCGGTTTTACTCTGATCTTGAGCTCACAGAAAAGGAAATTGAACGCATGGTGATCGAAGTTTCTCGAGCTGAGTACCTTGCAGATAGTGCATTTAAGCAACAGCTTGGCAATAGAGAATCCTCTACCTCAAATGCTGAACCATCATCTTCTGGAGCAAGATCATCGGGCACTGATCGCAAGACGGAACATGGGAGAGAGCATGGTTCTGATCTTAGTAGCGGTATGCAGATGTTACTATCAATGGGATTCAGTTACATGCAAGCGATTGAGGCTTACAGCATATTTGGGGACGATGTTGATTCAATGGTTTGTTACCTGTTAGAAACCGGCAGTAGCAGCAGACGTAAAGGCAAGGCCACTGAATGA	1560	0.4776	MTRVLVQRGSSGGGSTSSNPNRSGGGSSSNSSARAEPQVPVLPVNSDEVVVGVVSDEVLESGDKGKSDESVHFEQGDGSCDDGVAAAVVVESDVREEIVKGLSGLRVGERVVSESEVSSGDSSSLLVGGGGSCPPPPPVPPPKPSVTGNLNPRRSVSGSLNSGSVGSSRRAWPVVSARTSPVGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSEVYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYTTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDKVKAAIKAQQDQQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLADSAFKQQLGNRESSTSNAEPSSSGARSSGTDRKTEHGREHGSDLSSGMQMLLSMGFSYMQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE*	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso11g1370	519	Gene3D	-	213	364	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	148	169	-	-
	Gso11g1370	519	ProSiteProfiles	Ubiquitin-associated domain (UBA) profile.	466	507	IPR015940	-
	Gso11g1370	519	PANTHER	OTU DOMAIN CONTAINING PROTEIN	33	483	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	1	47	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	102	203	-	-
	Gso11g1370	519	ProSiteProfiles	OTU domain profile.	231	354	IPR003323	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	131	147	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	432	453	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	1	36	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	180	195	-	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	432	470	-	-
	Gso11g1370	519	Pfam	OTU-like cysteine protease	239	348	IPR003323	-
	Gso11g1370	519	SUPERFAMILY	Cysteine proteinases	218	354	IPR038765	-
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	59	76	-	-
	Gso11g1370	519	PANTHER	OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1	33	483	-	-
	Gso11g1370	519	SUPERFAMILY	UBA-like	469	506	IPR009060	GO:0005515
	Gso11g1370	519	MobiDBLite	consensus disorder prediction	59	81	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso11g1370	Gso-Chr11	15587150	15597060	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g1370	K12655		-	gmx:100780250	850.121

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso11g1370	11	15587150	15597060	Gso11g1370	11	15587150	15597060	ECH
	Gso12g0746	12	7519235	7524937	Gso11g1370	11	15587150	15597060	GST