Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0716 ATGCCTAAGATAAGCCAAGAAAAAGATGGATCTGAAACCGAAACCCTAAAACCAATCATGGATCCATTTCCCTTTCCACATTTAGCTACCACGAAACCTAATTTCAATTTCTCTGTGAAGAGTCATTTTCCGATGAAACGCACCGTTCGGCCCCTCTTCGCGCTCCTCCTCCTCCTCGTATTCGCCGCCACGCTCACCTCACGCGCCGTCCTCCGCCGCGGCATCCTCTCCATCGAGCTCGAATCCCGCGTCCGGATCCGCCGCCATATTCCGCCGCCGCCGCAGCTCAACGCCACGCTCCTCCACCACGCAGCCGTCGAAATTGGCGAGGAGAAGTTCAAGCAGGAGATCCAGAGCCTCCTTGATGGCAACTTCGGCAGCCACGCGCGCCACCGCACCTTCGTCTCCTGGCGCCGCTTCATCCACCACGACCGCGGCAGCGCCGGAGTCACCGCCGCCAAACTCCCGGCGACTATCCGGTCGCCGCTCTTCTACCGCTCCTGGCTCGACTTCCGGAAGGTCCTCCACGACTGGTTCCGGAAGCGACGATTCCAACCCGGTATCATGTCCGGGTTGACTCGGTCAATTAAGCTTCCAATTGATTCACACAACAACAACAACAACAACAACAAACTACAAACCAATAACAAAAACAAATACTCTTCCTGTGCCGTAGTTGGAAACAGCGGAATTTTGTTGAATAGAGACTATGGTAGTGAAATTGATTCCCATGAGTTTGTGATAAGGTTGAACAATGCTAGGGTTGATCACTTTGAGACCAAGGTTGGAAAAAAAACTAGCATTTCATTCATGAATAGTAACATCTTGCATTTGTGTGCTAGAAGGGGAGGGTGTTTCTGCCACCCTTATGGTGACCGTGTTCCGATTGTTATGTACATTTGTCAAGCCTTGCATTTCATGGACTACACTGTGTGCAATGCTTCTCACAAGGCTCCTTTGTTGGTGACTGATCCTAGGTTTGATGTATTGTGTGCGAGGATTGTGAAGTACTATTCGTTGAAGAGGTTTGTGGAGGAGAGTGGGAAGGGTTTGGAGAAGTGGGGAGAGGCTCATGATGGTTCTCTTTTTCACTACTCTTCAGGGATGCAGGCTGTGATGCTGGCTTTGGGGATTTGTGATAGGGTTAGCATTTTTGGGTTTGGGAAATCGACTTCTGCTAAGCACCATTACCACACTAACCAGAAGGCTGAGCTTCACTTGCATGACTATGAGGCTGAGTATGCGTTTTATAGGGACCTTGTGGATGGGAAAAGGCCTATACCCTTTCTTGAGGATAGGTTTAAGGTTCCTCCTGTTGTCATGTATCAATGA 1332 0.5008 MPKISQEKDGSETETLKPIMDPFPFPHLATTKPNFNFSVKSHFPMKRTVRPLFALLLLLVFAATLTSRAVLRRGILSIELESRVRIRRHIPPPPQLNATLLHHAAVEIGEEKFKQEIQSLLDGNFGSHARHRTFVSWRRFIHHDRGSAGVTAAKLPATIRSPLFYRSWLDFRKVLHDWFRKRRFQPGIMSGLTRSIKLPIDSHNNNNNNNKLQTNNKNKYSSCAVVGNSGILLNRDYGSEIDSHEFVIRLNNARVDHFETKVGKKTSISFMNSNILHLCARRGGCFCHPYGDRVPIVMYICQALHFMDYTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEAHDGSLFHYSSGMQAVMLALGICDRVSIFGFGKSTSAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGKRPIPFLEDRFKVPPVVMYQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0716 443 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 44 443 - -
Gso12g0716 443 Gene3D Glycosyl transferase family 29 110 425 IPR038578 -
Gso12g0716 443 PIRSF Sialyl_trans 332 426 IPR012163 GO:0006486|GO:0008373
Gso12g0716 443 PIRSF Sialyl_trans 45 307 IPR012163 GO:0006486|GO:0008373
Gso12g0716 443 Pfam Glycosyltransferase family 29 (sialyltransferase) 209 422 IPR001675 GO:0006486|GO:0008373
Gso12g0716 443 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 44 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0716 Gso-Chr12 7220924 7223154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0716 219 387 Glycosyltransferase AT3G48820 25.146 4.36e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0716 K00786 - gmx:100816284 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0716 12 7220924 7223154 Gso11g1393 11 15961267 15963382 GST