Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1393 ATGCCTAGGGTAAACGAATCTGAAAAAGATGGATCTGAAACCGAAACCCTAAAACCAATCATGGATCCATTTCCCTTTCCACATTTAGCTACCACGAAACGTAATTTTAATTTCTCTCTCAAGAGTCATTTTCCGATGAAACGCACCGTTCGGCCCCTCTTCGCGCTCCTCCTCCTCCTCGTCTTCGCTGCCACCCTCACCTCACGCGCCGTCCTCCGCCGCGGCATCCTCTCCATCGAGCTCGAATCCCGCGTCCGGATCCGCCGCCCTCCGCCGCAGCTCAACTCCACGCTCCTCCACCACGCCGCCGTCGAAATCGGCGAGGAGAAGTTCAAGCAAGAGATTCAGAGCCTCCTCGACGGCAACTTCGGCAGCCAAGCGCGCCACCGCACCTTCGTCTCCTGGCGCCGCTTCATCCACCATGACCGCGGCGGCGCCGAAGGCGCCGTGGCCAACCTCCCGGCGACGCTCCGCTCGCCGCTCTTCTATCGCTACTGGCTCGACTTCCGGAAGGTCCTCCACGACTGGTTCCGGAAGCGACGATTCCAACCCGGTATCATGTCCGAGTTGACTCGGTCAATTAAGCTTCCAATTGATTCACACAACAACAACAACAAACTACAAACCAATAACAAAAATAAAAACAAATACTCTTCTTGTGCCGTAGTTGGAAACAGTGGAATTTTGCTGAATAGAAACTACGGTAGTGAAATTGATTCCCATGAGGTTGTGATAAGGTTAAACAATGCTAGGGTTGATCAGTTTGAAACCAAGGTTGGGAAAAAAACTAGCATTTCATTCATGAATAGTAACATCTTGCATTTGTGTGCTAGAAGGGGAGGGTGCTTTTGCCACCCTTATGGTGATAACGTTCCAATTGTAATGTACATTTGTCAAGCCGTGCATTTCTTGGACTACACTGTGTGCAATGCTTCTCACAAGGCTCCTTTGTTGGTCACTGATCCTAGGTTTGATGTGTTGTGTGCGAGGATTGTGAAGTACTATTCGTTGAAGAGGTTTGTGGAGGAGAGTGGGAAGGGTTTGGAGAAGTGGGGTGAGGCTCATGATGGTTCTCTTTTTCACTACTCTTCAGGGATGCAGGCTGTGATACTGGCTTTGGGGATTTGTGATAGGGTTAGCATTTTTGGGTTTGGGAAATTGGCTTCTGCTAAGCACCATTACCACACTAACCAGAAGGCTGAGCTTCACTTGCATGATTATGAGGCTGAGTATGCGTTTTATAGGGACCTTGTGGATGGGAATAGGGCTATACCCTTTCTTGAGGACAGGTTTAAGGTTCCTCCTGTTGTTATGTATCAGTGA 1323 0.4966 MPRVNESEKDGSETETLKPIMDPFPFPHLATTKRNFNFSLKSHFPMKRTVRPLFALLLLLVFAATLTSRAVLRRGILSIELESRVRIRRPPPQLNSTLLHHAAVEIGEEKFKQEIQSLLDGNFGSQARHRTFVSWRRFIHHDRGGAEGAVANLPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSIKLPIDSHNNNNKLQTNNKNKNKYSSCAVVGNSGILLNRNYGSEIDSHEVVIRLNNARVDQFETKVGKKTSISFMNSNILHLCARRGGCFCHPYGDNVPIVMYICQAVHFLDYTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEAHDGSLFHYSSGMQAVILALGICDRVSIFGFGKLASAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGNRAIPFLEDRFKVPPVVMYQ* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1393 440 MobiDBLite consensus disorder prediction 1 20 - -
Gso11g1393 440 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 45 440 - -
Gso11g1393 440 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 45 440 - -
Gso11g1393 440 MobiDBLite consensus disorder prediction 1 16 - -
Gso11g1393 440 Pfam Glycosyltransferase family 29 (sialyltransferase) 195 419 IPR001675 GO:0006486|GO:0008373
Gso11g1393 440 Gene3D Glycosyl transferase family 29 95 424 IPR038578 -
Gso11g1393 440 PIRSF Sialyl_trans 329 428 IPR012163 GO:0006486|GO:0008373
Gso11g1393 440 PIRSF Sialyl_trans 46 303 IPR012163 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1393 Gso-Chr11 15961267 15963382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1393 216 384 Glycosyltransferase AT3G48820 24.852 2.25e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1393 K00786 - gmx:100789506 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1393 11 15961267 15963382 Gso11g1393 11 15961267 15963382 ECH
Gso12g0716 12 7220924 7223154 Gso11g1393 11 15961267 15963382 GST