Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0690 ATGGTTGAATCTCAGCCCAAGTTCTTCATCCCCGACTCGATCAATGGAGTGAATTTCGACGTGGCGGCGCAGATTAAGATGGTGTGGGAAGTGATCAAGGCGCCATTGATCGTGCCACTGCTGAACCTCGCAGTGTACATTTCCCTAGCGATGGCACTCATGCTCTTCATGGAGAGGGTGTACATGGGCATTGTCATCATCCTCGTTAAGCTCTTCTGGAAGAAGCCCCACCAGCGCTACAAGTTCGAGCCACTCCAAGACGACGAGGAACTCGGGAACTCTAATTACCCCGTCGTGCTTGTGCAGATTCCAATGTTCAATGAAAAAGAGGTGTACAAGGTGTCGATTGGAGCAGCTTGCAATCTTTCATGGCCTGTGGATCGTCTCGTGATCCAAGTGCTCGATGATTCTACTGACCCTACCATCAAGCAAATGGTGGAGATGGAATGCAATAGATGGGCAAGTAAGGGCATAAACATAGTGTACCAAATCAGAGAAACAAGAGGAGGGTACAAAGCGGGTGCTCTAAAAGAAGGCCTAAAACGTAACTATGTGAAACACTGCGAGTACGTGGCAATTTTCGATGCAGATTTCAGGCCAGAGCCAGATTTTCTCAGACGTTCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAATTCTGATGAGTGTTTATTGACAAGAATGCAAGAGATGTCCCTGGATTACCATTTCACAGTAGAGCAAGAAGTTGGATCAGCCACTCACGCTTTCTTCGGTTTCAACGGAACTGCTGGCATTTGGAGAATAGCTGCTATCAATGAAGCTGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCTAGTACTTTGAGAGCCTTCAGATTCCAGCAGCACAGATGGTCTTGTGGTCCTGCTAATTTGTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTTAAGTTTTGGAAGAAAGTGTATGTTATATACAGCTTTTTCTTTGTTCGCAAAATCATCGCCCACATGGTCACCTTCTTCTTCTACTGTGTTGTGATTCCCCTTACAATCCTGGTCCCTGAGGTTCATGTTCCAATCTGGGGAGCTGTTTATATTCCTTCTGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACATTTATAGGTCTCTTAGAGTATGGGAGGGCTAATGAATGGGTTGTGACTGAAAAACTTGGTGACTCTGTCAACAATAATAATAAGAATAAATCAGGAGATGCTGCCAAGAAGAATAATGCCATCAAGGCCACCCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTTACTGGAGCTGGGATTTGCTGTCTTCCTCTTCGTATGTGGATGCTATGATTATGTTCATGGGAAACACAACTACTTCATCTATCTCTTCCTTCAGACCTTAACATTCTCAATTGTAGGATTTGGCTACGTTGGCACCATCGTGTAA 1632 0.4498 MVESQPKFFIPDSINGVNFDVAAQIKMVWEVIKAPLIVPLLNLAVYISLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQDDEELGNSNYPVVLVQIPMFNEKEVYKVSIGAACNLSWPVDRLVIQVLDDSTDPTIKQMVEMECNRWASKGINIVYQIRETRGGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVIPLTILVPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNNNNKNKSGDAAKKNNAIKATPKKTRSKFVERLNLLELGFAVFLFVCGCYDYVHGKHNYFIYLFLQTLTFSIVGFGYVGTIV* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0690 543 PANTHER BNAC09G36340D PROTEIN 5 543 - -
Gso12g0690 543 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 377 IPR029044 -
Gso12g0690 543 Pfam Glycosyl transferase family group 2 190 396 IPR001173 -
Gso12g0690 543 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Gso12g0690 543 CDD CESA_CaSu_A2 97 333 - -
Gso12g0690 543 PANTHER - 5 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0690 Gso-Chr12 6857667 6863729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0690 5 543 Miscellaneous Gene Families AT5G22740 81.296 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0690 K13680 - gmx:100791645 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0690 12 6857667 6863729 Gso11g1428 11 16452595 16458656 GST