Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1428 ATGGTTGAATCTCAGCCCAAGTTCTTCATCCCGGACTCAATCAACGGCGTGAATTTCGACGTAGCGGCGCAGATTAAGATGGTGTGGGAAGTGATGAAGGCGCCACTGATCGTGCCTCTGCTGAACCTGGCAGTGTACATTAGCCTCGCCATGGCGCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTCAAGCTCTTCTGGAAGAAGCCACACCAGCGCTACAAGTTCGAGCCACTCCAAGACGACGAGGAACTCGGCAACTCTAATTACCCCGTCGTGCTTGTCCAGATTCCAATGTTCAATGAGAAAGAGGTGTACAAGGTGTCGATTGGAGCAGCTTGTAATCTTTCATGGCCTGCGGATCGTCTCGTCATCCAAGTGCTTGATGATTCTACTGACCCTACCGTCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGTAAGGGCATAAACATAGTGTACCAAATCAGAGAAACAAGAGGAGGGTACAAAGCGGGTGCTCTAAAAGAAGGCCTAAAACGTAACTATGTGAAACACTGTGAGTACGTGGCAATTTTCGATGCAGATTTCAGGCCAGAGCCAGATTTTCTCAGACGTTCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAATTCTGACGAGTGTTTATTGACAAGAATGCAAGAGATGTCCCTGGATTACCATTTCACAGTAGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTATTTGGAGAATAGCTGCTATCAACGAAGCTGGTGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGTGACCTCCAGGCCAAAAGTGAGCTTCCCAGTACTTTGAGAGCCTTCAGATTCCAGCAGCACAGATGGTCATGTGGTCCTGCTAATTTGTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTTAGGTTTTGGAAGAAAGTGTATGTTATATACAGCTTTTTCTTTGTTCGCAAAATCATCGCCCACATGGTCACCTTCTTCTTCTACTGTGTTGTGATTCCCCTTACAATCTTGGTCCCAGAGGTTCATGTTCCAATCTGGGGAGCTGTTTATATTCCTTCTGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACATTTATAGGTCTCTTAGAGTATGGGAGGGCTAATGAATGGGTTGTGACTGAAAAACTTGGTGACTCTGTCAATAATAATAAGAATAAATCAGGAGATGCTGCCAAGAAGAATAATGCCATCAAGGCCACCCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTTACTGGAGTTGGGATTTGCTGCCTTCCTCTTCGTATGTGGATGCTATGATTATGTTCATGGGAAACACAACTACTTCATCTACCTCTTCCTTCAGACCTTAACATTCTCAATTGTAGGATTTGGCTACGTTGGCACCATCGTGTAA 1629 0.4543 MVESQPKFFIPDSINGVNFDVAAQIKMVWEVMKAPLIVPLLNLAVYISLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQDDEELGNSNYPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPTVKQMVEMECQRWASKGINIVYQIRETRGGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVIPLTILVPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNNNKNKSGDAAKKNNAIKATPKKTRSKFVERLNLLELGFAAFLFVCGCYDYVHGKHNYFIYLFLQTLTFSIVGFGYVGTIV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1428 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Gso11g1428 542 PANTHER BNAC09G36340D PROTEIN 5 542 - -
Gso11g1428 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 377 IPR029044 -
Gso11g1428 542 CDD CESA_CaSu_A2 97 333 - -
Gso11g1428 542 Pfam Glycosyl transferase family group 2 190 396 IPR001173 -
Gso11g1428 542 PANTHER - 5 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1428 Gso-Chr11 16452595 16458656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1428 5 542 Miscellaneous Gene Families AT5G22740 82.189 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1428 K13680 - gmx:100802752 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1428 11 16452595 16458656 Gso11g1428 11 16452595 16458656 ECH
Gso12g0690 12 6857667 6863729 Gso11g1428 11 16452595 16458656 GST