Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0676 ATGCAGCCAAATTTGTTTCCCTTTGGAAGCGTGCTGGGGAATCCTTTCATTTTCAATGGCGACGGCGATTTGAGCGAGGGAGGAGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGCGGAGCAATGGATTTGTCCAAGGTCGGCGAAAAAATCTTGAGCTCCGTTAGGTCCGCCAGATCTCTCGGATTGCTCCCTCCCGTTTCTGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATACAGTCTTTCTTCAAGTTCAGAAGAACTAAGTTCAATATATGGAAGCATACCTCAAGGCCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAAGAGGACTTTGATCCAATTAGGCATGTTTTAGAGCACGTTCCAGTTGAAGAAAATGAGCTGACATATTTTGAAAAACAGGCTGCCCTTAGATTGGCACAACTGGATAGAGTAGCTGAGCGTTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACATCATCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCTAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGACTGAACTTCGACGTGCTTTGGACATGCAATCAACACTTGAATCCCTTGTAGAAGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAACTCTTGGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTATTGGGAGTATGCCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACTGCCGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCTATTGTGCATGAGGATGAGGAGGGACTTTCGCAAAATAGTTGGCTCACTTACAGTGATTTATGCCTTCGAATACCTGATTCAAAGTTCAGGCAATGCTTATTACGAACATTGGCTGTTTTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCCAGCTAGAAAGAAAGGACTCAGCAGCACAAACTTCAAATAAGTGCAATGAAGAAATTTCTTGTAGTCCAGGTGAGCCTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTATGTCCAGTTCCGGAGATGTAATACATGGCTCATCTTCTAGGGAGGAATCTGCAACAGTGAGCTCACTGACTGAAACTAGTGGTTCACCATATAGTGATTCTCATGATACAATTAAGGAGGCTGGAAAGGAGGACAGTGCAACATCAAGCATTGAGTCCCCTTGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCACAGACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCACTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTACAGCCTATACTGCTAGCATTCATCAATTCTTGAAAAATTATGAAGATCTCAGCATCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGTTGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATATGCATGCTCTAAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCTCCAGATACAGTACAAATGATCAGTTTTGCAGGTCTTATTGGTGATGGAGCACCGTTGATTTCTTTATCCAGTGGTAAATCAACTAATGTCAGTGCAGTCCATTCCACTAAATCGGTCAATGTGGTTCACACTGGTGCAAGGAAGAATGGGTTTTCTCACTGGATTAAAAGTGGAAACCCTTTCCAGCAAAAATTACCAACCTCCAATGAAGGTCGTGGTTACTCACAACCTAATGGATCAGTTTGTGGTGAATTTGACGGAAGTTCAACCAATAATTTTCATGATGATAAAACACCCAGAAAGAATGATTTCAATCAAATGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTACCAAGTCGAAGTTCTCAACCCCATCATTCAAGAACTCTCTCTTCACATGGAAATGACGAAGAGAATACAACTCAAACTGGATCTTCTCTTTGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTCAAGGGAGTATGCCAATTGTTTGGAATTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACGGTCAGCAAAACACTAGTTCAACTGGAAAAAGCACAACTAGCTCTCTTAATTATCGCTTGAGAACAGCTTTATCCAGAGTAAATCAAGATTGTGAAGAGTGGATTAAGTCTCAATCGTCTTCACCAACATCTTTGGGTTCACCATTTGTACATACTGAGTTGACACCTACACACCCTCCCAATACAAATTTTGGTCACTCCTCAGGGACTTCTTTGGGTCTCAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTCGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATGTTCATCGGACTACAGTGAGACTACTGTTGCACATTAATGGATATGTTGAACGTGTTGCCAATTGTAAATGGGAAGTAAAAGAGCTCGGCATGGAGCATAACGGATATGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACACGACTTGCTCATGGAGGAATTCGTAAAGAGGTTCAAGACCTATTATTGGATTATGGGCTTGAAATTGTGGCTGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCCCTTATGTCATTAGATCTGCAGGTTTTGATCAATGGGTTACAGCATTTTGTGGCGCTGAATGTGAAGCCCAAGCTACAAATGGTTGAAACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCACGAGCACACCCGGAATACAGTAAAAGCCAGATTGTTGGACTGGTCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGACATACTGGAAAAAATTGAATGA 3387 0.4128 MQPNLFPFGSVLGNPFIFNGDGDLSEGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSIPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLTELRRALDMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEDEEGLSQNSWLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLERKDSAAQTSNKCNEEISCSPGEPQEVDSDVRACNNSMSSSGDVIHGSSSREESATVSSLTETSGSPYSDSHDTIKEAGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSSATAYTASIHQFLKNYEDLSIFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNMHALKMVLEKETWLKLPPDTVQMISFAGLIGDGAPLISLSSGKSTNVSAVHSTKSVNVVHTGARKNGFSHWIKSGNPFQQKLPTSNEGRGYSQPNGSVCGEFDGSSTNNFHDDKTPRKNDFNQMNGANSVSEDENEDLLADFIDEDSQLPSRSSQPHHSRTLSSHGNDEENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGVCQLFGIFFYFIYETFGQQNGQQNTSSTGKSTTSSLNYRLRTALSRVNQDCEEWIKSQSSSPTSLGSPFVHTELTPTHPPNTNFGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVALNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIVGLVNLVATMKGWKRKTRLDILEKIE* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0676 1128 MobiDBLite consensus disorder prediction 748 776 - -
Gso12g0676 1128 PANTHER UNCHARACTERIZED 18 1128 IPR040047 GO:0032456|GO:0042147|GO:1990745
Gso12g0676 1128 MobiDBLite consensus disorder prediction 671 733 - -
Gso12g0676 1128 Pfam Protein of unknown function C-terminus (DUF2451) 898 1128 IPR019514 -
Gso12g0676 1128 Pfam Vacuolar-sorting protein 54, of GARP complex 127 416 IPR019515 -
Gso12g0676 1128 MobiDBLite consensus disorder prediction 457 501 - -
Gso12g0676 1128 MobiDBLite consensus disorder prediction 673 707 - -
Gso12g0676 1128 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 18 1128 - -
Gso12g0676 1128 MobiDBLite consensus disorder prediction 432 451 - -
Gso12g0676 1128 MobiDBLite consensus disorder prediction 457 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0676 Gso-Chr12 6620730 6637252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0676 K23288 - gmx:100788476 2168.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0676 12 6620730 6637252 Gso11g1442 11 16692726 16708908 GST