Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1442 ATGCAGCCGAATTTGTTTCCCTTTGGAAGCGTGCTGGGGAATCCTTTCATTTTCAATGGCGACGGCGATTTGAGCGAGGGAGGAGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCCAAGGTCGGCGAAAAAATCTTGAGTTCCGTTAGGTCCGCCAGATCTCTTGGATTGCTCCCTCCCGTTTCTGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATACAGTCTTTCATCAAGTTCAGAAGAACTAAGTTCAATATATGGAAGCAGACCTCAAGGCCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAAGAGGACTTTGATCCAATTAGGCATGTTTTAGAGCACGTTCCAGTTGAAGAGAACGAGCTAACATATTTTGAAAAACAGGCTGCCCTTAGATTGGCACAACTGGATAGAGTAGCCGAGCGTTTATCTCGCCATGTTATGGAGCATCATGAAGTGATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACATCATCTATGAATGAGGTTTCAAGAGATCTGATTGTGAATTCTTATTCTAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGACTGAACTTCGACGTGCATTGGACATGCCATCAACACTTGAATCCCTTGTAGAAGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAAATCTTAGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTATTGGGAGTATGCCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACTGCCGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCTATTGTGCATGAGGATGAGGAGGGACTTTCGCAAAATAGTAGGCTTACTTACAGCGACTTATGCCTTCGAATACCTGATTCAAAGTTCAGGCAATGCTTATTACGAACATTGGCTGTTTTGTTTGACCTTATGTGTTCATACCATGAAATTATGGAATTCCAGCTAGAAAGAAAGGACTCAGCAGCACAAACTTCAAATAAGTGCAATGAAGAGATTTCCTGTAGTCCAGGTGAGACTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAATAATTCTATGTCCAGTTCCAGAGATGTAATACATGGCTCATCTTCTAGGGAGGAATCTGCAACAAAGAGCTCACTGACTGAAACCAGTGGTTCACCATATAGTGATTTTCATGATACAATTAAGGAGGCTGGAAAGGAGGACAGTGCAACATCAAGCATTGAGTCCCCTTGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCACAGACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCACTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTGCAGTCTGTACTGCTAGCATTCATCAATTCTTGAAAAATTATGAAGACCTCGGTGTCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGTTCTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCCCCAGAAACAGTACATATGATCAGTTTTGCAGGACTTATTGGTGATGGAGCACCGTTGATTTCTTTATCCAGTGGTAAATCAACTAATGTCAGTGCAGTCCATTCCATTAAATCGGTGAATATGGTTCACACTGGTGCAAGGAAGAATGGGTTTTCTCACTGGATTAAAAGTGGAAACCCTTTCCAGCAAAAATTACCAACCTCCAATGAAGGTCGTGGTTACTCGCAACCTAATGGATCAGTTTGTGGTGAATTTGACGGAAGTTCAACCAATAATTTTCATGACGATAAAACACCCAGAAAGAATGATATCAATCAAATGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGATAGTCAACTACCAAGTCGAAGTTCTAAACCCCATCATTCAAGAGCTCTCTCTTCACATGTTAATGACGAAGAGAATACAACACAAACTGGATCTTCTCTCTGTCTATTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTCAAGGGAGTATGCCAATTGTTTGGATTTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACGCTAGTTCAACTGGAAAAGGCACTTCTAGCTCTCTTAACTATCGCCTGAGAACAGCTTTATCCAGAGTAAACCAAGATTGTGAAGAGTGGATTAAGTCTCAATCGTCGTCACCAACATCTTTGAGTTCACCATTTGTACATGCTGAGTTGACACCTACACACCCTCCCAATACAAATTATGGTCACTCCTCAGGGACTTCTTTGGGTCTGAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCTAGAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATGTTCATCGGACTACAGTGAGACTACTGTTGCACATTAATGGATATGTTGAACGTGTTGCCAATTGTAAATGGGAAGTAAAAGAGCTTGGCATGGAGCATAATGGATATGTTGATTTGATGCTGGGGGAGTTTAAGCACTATAAAACACGACTTGCTCATGGAGGAATTCGTAAAGAGGTTCAAGACCTATTATTGGATTATGGGCTTGAAATTGTGGCGGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGGGCCCTTATGTCATTAGATCTGCAGGTTTTGATCAATGGGTTACACCATTTTGTGTCGCTGAATGTGAAGCCCAAGCTACAAATGGTTGAGACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCACGAGCACACCCGGAATACAGTAAAAGCCAGGTTGTTGGACTGGTCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGACATACTAGAAAAGATTGAATGA 3375 0.4157 MQPNLFPFGSVLGNPFIFNGDGDLSEGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLTELRRALDMPSTLESLVEEGNYWKAFQVLSEYLQILDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEDEEGLSQNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMEFQLERKDSAAQTSNKCNEEISCSPGETQEVDSDVRACNNSMSSSRDVIHGSSSREESATKSSLTETSGSPYSDFHDTIKEAGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSSAAVCTASIHQFLKNYEDLGVFILTGEAFCGIEAVEFRQKLKVLCENYFIAFHRQNVHALKMVLEKETWLKLPPETVHMISFAGLIGDGAPLISLSSGKSTNVSAVHSIKSVNMVHTGARKNGFSHWIKSGNPFQQKLPTSNEGRGYSQPNGSVCGEFDGSSTNNFHDDKTPRKNDINQMNGANSVSEDENEDLLADFIDEDSQLPSRSSKPHHSRALSSHVNDEENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGVCQLFGFFFYFIYETFGQQNASSTGKGTSSSLNYRLRTALSRVNQDCEEWIKSQSSSPTSLSSPFVHAELTPTHPPNTNYGHSSGTSLGLKERCVAVDTISLVARILNRSRAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSLNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQVVGLVNLVATMKGWKRKTRLDILEKIE* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1442 1124 Pfam Protein of unknown function C-terminus (DUF2451) 894 1124 IPR019514 -
Gso11g1442 1124 Pfam Vacuolar-sorting protein 54, of GARP complex 127 416 IPR019515 -
Gso11g1442 1124 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 18 1124 - -
Gso11g1442 1124 MobiDBLite consensus disorder prediction 675 707 - -
Gso11g1442 1124 MobiDBLite consensus disorder prediction 456 488 - -
Gso11g1442 1124 MobiDBLite consensus disorder prediction 748 776 - -
Gso11g1442 1124 MobiDBLite consensus disorder prediction 456 491 - -
Gso11g1442 1124 MobiDBLite consensus disorder prediction 675 732 - -
Gso11g1442 1124 PANTHER UNCHARACTERIZED 18 1124 IPR040047 GO:0032456|GO:0042147|GO:1990745
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1442 Gso-Chr11 16692726 16708908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1442 K23288 - gmx:100803274 2155.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1442 11 16692726 16708908 Gso11g1442 11 16692726 16708908 ECH
Gso12g0676 12 6620730 6637252 Gso11g1442 11 16692726 16708908 GST