Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0675 ATGGAGAAAAAGGTCCCCTTTTTTTTCTCCATTCTCTTATTCATTGCTCTGCTATTTCATGGAGGAAAGGTGTTAGCTTTGAATTGCCAAGACGGATCAGAGGAATGGGGATACGTTCAAGTCAGACCCAAAGCGCACATGTTTTGGTGGCTTTATAAAAGTCCATATAGAGTGGAAGATCCTTCTAAGCCGTGGCCAATTGTTCTCTGGTTGCAAGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAGGAGATTGGGCCTTTGGACAGAAGCTTGAAGCCGCGGAATTCCACATGGTTGAGAAAAGCAGATCTCTTGTTTGTGGACAATCCAGTTGGAACCGGGTACAGTTTTGTGGAGGATAAGAAACTCTTTGTGAAAACAGATGATGAGGCAGCCACCGACTTGACTACATTGTTGATTGAATTATTCAGTGGGGATGAGAAACTGCAAAAGAGTCCTCTGTTCATTGTGGCAGAGTCATATGGTGGCAAATTTGCTGTCACTGCTGGGTTATCTGCTCTGAAAGCTATAGAAGATGGGAAATTGAAGCTTAGACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCCCCTGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTTAAAGACCTCTCACGACTTGACGATAATGGACTGCAAAAATCAAACAGTATAGCTGAGAGGATCAAGCAGCAAATTGAGGACGGTAAATTTGTTGAAGCCACCGACTCATGGGGTGAACTTGAGAATGTGATTGCTACCAGCAGCAACAATGTGGACTTCTACAATTTATTGGAGGATGCGGGAGGTGATGACATAGCAGCAATGGAGTTAGGGTCATATGAGAAATTATCAATGGAGAAGTACTCCAGATATCTTACTTCCATGAGGTCAAGGTCATCATCTCCTGGTGGTGATGATGATCTTGACAAGTTACTAAACGGTGTCATAAAGAAAAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAGGGCAGTCTGGTGATGTTTTCAACTATCTTGCAGGTGATTTTATGAGACCAAGAATTAACGAGGTTGATGAACTGCTGACAAAAGGGGTCAATGTTACTGTGTACAATGGACAAGTCGATCTGATTTGTTCAACCAAGGGGACTGAAGCTTGGGTTCATAAACTAAAGTGGGAAGGGCTTAAAATTTTCTTGGCGAAAGATAGAACACCTCTCTACTGCGGAAGTGACAAATCTACAACCAAAGGCTTTGTTAAGTCATATAAAAACCTATACTTCTATTGGATCCTCAAAGCTGGCCATTTTGTACCCACTGATCAGCCATGCGTGGCACTAGACATGGTGGGTGCAATTACACAGTCACCAGCTACTTGA 1380 0.4333 MEKKVPFFFSILLFIALLFHGGKVLALNCQDGSEEWGYVQVRPKAHMFWWLYKSPYRVEDPSKPWPIVLWLQGGPGASGVGIGNFEEIGPLDRSLKPRNSTWLRKADLLFVDNPVGTGYSFVEDKKLFVKTDDEAATDLTTLLIELFSGDEKLQKSPLFIVAESYGGKFAVTAGLSALKAIEDGKLKLRLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQKSNSIAERIKQQIEDGKFVEATDSWGELENVIATSSNNVDFYNLLEDAGGDDIAAMELGSYEKLSMEKYSRYLTSMRSRSSSPGGDDDLDKLLNGVIKKKLKIIPENVTWGGQSGDVFNYLAGDFMRPRINEVDELLTKGVNVTVYNGQVDLICSTKGTEAWVHKLKWEGLKIFLAKDRTPLYCGSDKSTTKGFVKSYKNLYFYWILKAGHFVPTDQPCVALDMVGAITQSPAT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0675 459 PANTHER CARBOXYPEPTIDASE 8 457 - -
Gso12g0675 459 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Gso12g0675 459 Pfam Serine carboxypeptidase 33 452 IPR001563 GO:0004185|GO:0006508
Gso12g0675 459 Gene3D alpha/beta hydrolase 22 458 IPR029058 -
Gso12g0675 459 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
Gso12g0675 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 457 IPR001563 GO:0004185|GO:0006508
Gso12g0675 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 98 110 IPR001563 GO:0004185|GO:0006508
Gso12g0675 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Gso12g0675 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Gso12g0675 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0675 Gso-Chr12 6612404 6618081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0675 K09646 - gmx:100787940 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0675 12 6612404 6618081 Gso11g1443 11 16715106 16722151 GST