Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1443 ATGGAAAAAAAGGTCCTTTTTTTTGTCTCCATTCTCTTATTCATTGCTCTGCTATTTCATGGAGGAAAGGTTTTAGCTTTCAAGAGCCAAGACGGATCAGAGGAATGGGGATACGTTCAAGTCAGACCCAAAGCGCACATGTTTTGGTGGCATTATAAAAGTCCATATAGAGTGGAAGATCCTTCTAAGCCGTGGCCAATTGTTCTATGGTTGCAAGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAGGAGGTTGGGCCTTTAGACACAAGCTTGAAGCCAAGGAACTCCACATGGTTGAAAAAAGCTGATCTCTTGTTTGTGGACAATCCAGTTGGAACCGGGTACAGTTTTGTGGAGGATAAAAAACTCTTTGTCAAAACAGATGATGAAGCAGCCACCGACTTGACTACGTTGTTGATTGAGTTATTCAATAGGGATGAGAAGCTGCAAAAGAGTCCTCTGTTCATCGTGGCAGAGTCATATGGTGGTAAATTTGCTGTCACTGTTGGGTTATCTGCTCTGAAAGCTATAGGAGATGGGAAATTGAAGCTTAGACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCCCCAGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTTAAAGACCTCTCACGACTTGACGATAATGGACTGCAAAGATCAAACAGTATAGCTGAGAGGATCAAGCAGCAAATTGAGGATGGTAAATTTGTTGAAGCCACCGAATCATGGAGTAAACTTGAGGATGTGATTTCCTCCAGCAGCAACAATGTGGACTTCTACAACTTATTGGAGGATGCGGGAGGTGATAACATAGCAGCAATGGAGTTAGGGTTATACGAAAAATTATCAATGAAGAGGTATTCTAGATATCTTTCTTCCATGAGGTCAAGGTCATCTCCTGGTGGTGATGATGATCTTGACAAGTTATTAAACGGTGTCATAAAGAAAAAATTGAAGATCATCCCTGAGAATGTCACATGGGGAGGGCAGTCAGGTGATGTTTTCGACTATCTTGCAGGTGATTTTATGAGACCAAGAATTAATGAGGTTGATGAACTGCTGACAAAAGGGGTCAATGTGACTGTATACAATGGACAAGTTGATCTGATTTGTTCAACCAAGGGGGCTGAAGCTTGGGTTCATAAACTAAAGTGGGAAGGGCTTAAAAATTTCTTGGCGAAAGATAGAACACCACTCTACTGCGGAAGTGACAAATCTACAACAAAAGGCTTTGCTAAGTCCTATAAAAACCTATACTTCTATTGGATCCTCAAAGCTGGCCATTTTGTACCCACTGATCAACCCTGCGTGGCACTAGACATGTTGGGTGCAATTACACAGTCACCAGCTACTTGA 1377 0.4248 MEKKVLFFVSILLFIALLFHGGKVLAFKSQDGSEEWGYVQVRPKAHMFWWHYKSPYRVEDPSKPWPIVLWLQGGPGASGVGIGNFEEVGPLDTSLKPRNSTWLKKADLLFVDNPVGTGYSFVEDKKLFVKTDDEAATDLTTLLIELFNRDEKLQKSPLFIVAESYGGKFAVTVGLSALKAIGDGKLKLRLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQRSNSIAERIKQQIEDGKFVEATESWSKLEDVISSSSNNVDFYNLLEDAGGDNIAAMELGLYEKLSMKRYSRYLSSMRSRSSPGGDDDLDKLLNGVIKKKLKIIPENVTWGGQSGDVFDYLAGDFMRPRINEVDELLTKGVNVTVYNGQVDLICSTKGAEAWVHKLKWEGLKNFLAKDRTPLYCGSDKSTTKGFAKSYKNLYFYWILKAGHFVPTDQPCVALDMLGAITQSPAT* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1443 458 PANTHER CARBOXYPEPTIDASE 8 456 - -
Gso11g1443 458 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
Gso11g1443 458 Gene3D alpha/beta hydrolase 20 457 IPR029058 -
Gso11g1443 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 456 IPR001563 GO:0004185|GO:0006508
Gso11g1443 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 98 110 IPR001563 GO:0004185|GO:0006508
Gso11g1443 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Gso11g1443 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Gso11g1443 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Gso11g1443 458 SUPERFAMILY alpha/beta-Hydrolases 26 455 IPR029058 -
Gso11g1443 458 Pfam Serine carboxypeptidase 31 451 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1443 Gso-Chr11 16715106 16722151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1443 K09646 - gmx:100808412 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1443 11 16715106 16722151 Gso11g1443 11 16715106 16722151 ECH
Gso12g0675 12 6612404 6618081 Gso11g1443 11 16715106 16722151 GST