Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0673 ATGGCTCCAAAACGTGCTGAGAAGCTAGTGGTCAGATCCACCAAGAAAGTTGTGGAATCAAGTGTGCTGGTTTCTGTTGTAGGCAAAAGACTAACCCGTGGAAAAAAAGATACTCAAACAACTGATGGAGAAGAAGAAGTAGGTAGCCAAGAGCATCTGGTGGTCATTCCTATTCAAGAAGTGACTCCTCAAGCACAAAAGGATTCACCTAACTCTGCCATCACCACAGAAAACAAAGCTGAGCAAGAGAACAATACTCAAGATGGTGGAGTCGAAAATAATCAAGAGGAAGAGGAAGAGCATGAGGAAGTGAAAGAGAAGAAGAATAAGGCCAAGACCCCAAAAGGGAAAAATGGGAAGGAGAAAAAAAGAGGGAGAAAAAAGGGTAGGAGAAGTGTTGAAGGGTACCAGAGGTATGTATATAGGGTGTTGAAGCAAGTGCACCCTGAAATGGGAATTTCTTCCAAGTGCATGACTGTTCTGAACAACTTGATGAATGACATGTTTGAGAGGCTGGCTTTTGAGGCTTCTAAGCTGAAGGACTACACTGGACACATGACATTGTCTTCAAGGGAGATTCAAGGAGCAGTGAGGCTGGTTTTGCCAGGAGAACTTGGAAAGCATGCAATTGCTGAAGGGGTCAAAGCTGTTAACAACTACACATCCTATGATGCTTGA 678 0.4366 MAPKRAEKLVVRSTKKVVESSVLVSVVGKRLTRGKKDTQTTDGEEEVGSQEHLVVIPIQEVTPQAQKDSPNSAITTENKAEQENNTQDGGVENNQEEEEEHEEVKEKKNKAKTPKGKNGKEKKRGRKKGRRSVEGYQRYVYRVLKQVHPEMGISSKCMTVLNNLMNDMFERLAFEASKLKDYTGHMTLSSREIQGAVRLVLPGELGKHAIAEGVKAVNNYTSYDA* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0673 225 Coils Coil 91 111 - -
Gso12g0673 225 Gene3D Histone, subunit A 60 223 IPR009072 GO:0046982
Gso12g0673 225 MobiDBLite consensus disorder prediction 111 131 - -
Gso12g0673 225 PRINTS Histone H2B signature 136 154 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 PRINTS Histone H2B signature 155 175 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 PRINTS Histone H2B signature 177 194 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 PRINTS Histone H2B signature 194 207 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 PRINTS Histone H2B signature 207 220 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 SUPERFAMILY Histone-fold 107 222 IPR009072 GO:0046982
Gso12g0673 225 Pfam Core histone H2A/H2B/H3/H4 81 199 IPR007125 GO:0003677
Gso12g0673 225 MobiDBLite consensus disorder prediction 62 91 - -
Gso12g0673 225 SMART h2b3 126 222 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 MobiDBLite consensus disorder prediction 28 131 - -
Gso12g0673 225 PANTHER HISTONE H2B 1 224 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gso12g0673 225 MobiDBLite consensus disorder prediction 30 49 - -
Gso12g0673 225 PANTHER HISTONE H2B.2 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0673 Gso-Chr12 6581061 6582121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0673 K11252 - gmx:100786873 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0673 12 6581061 6582121 Gso11g1444 11 16753010 16753894 GST