Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0648 ATGGGCGCGAAGAAGAAGAATGGCAACAACAAGGAGAACGAAGACAACACCACCACCACCGTCGTCTTGAAGGTCCAAATGCATTGCGACGGTTGCGCTTCCAAAATCATCAAGCACCTCCGCGCTTTCCAAGGTGTGGAGACGGTGAAGGCGGAGAGCGACGCCGGGAAGGTGACCGTGACCGGGAAAGTGGACCCCACGAAAGTGAGGGACAACCTGGCGGAGAAGATAAGGAAGAAGGTGGAACTGGTGTCTCCACAGCCCAAGAAGGAGAAAGAGAACGAGAAAGACCCCAAACCCAACAACAAATCCGAGAACAAAACCCAGGACAAAAAAACCAAGGACAAAGAGGTGGTGACTACAGCGGTTCTGAAAGTGGCACTGCATTGCCAGGGTTGCCTAGACAGGATTGGCAAAACTGTGTTGAAAACCAAAGGAGTGCAAGAAATGGCCATTGACAAGGAGAAGGAAATGGTGACTGTGAAGGGGACAATGGATGTGAAGGCTCTGGCAGAGAATCTCATGGAGAAGCTTAAGAGGAAGGTTGAGGTGGTTCCTCCCCAGAAAGATAAGGAAGGTGACAACAAGGAAGGTGGTGGTGGTGAGAAAGGATCAGGGAAGAAGAAGAACAAGGGTGGTGGAGGAGATAAGAATGAGAATATTGAAGATGGAATAGAGAAAATAGAGCATAACAGAATGGAGTATTTGGCACCACCTGCTTTTGGCTTTGGTTATGGACCTTATGGTGGTTATGGGCATGGACATGGGCATGGCAATATCGGTGGGTATAGCTGTGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCGGCACCACAAATGTTCAGTGATGAGAACCCGAATGCTTGTTCTGTCATGTGA 891 0.4972 MGAKKKNGNNKENEDNTTTTVVLKVQMHCDGCASKIIKHLRAFQGVETVKAESDAGKVTVTGKVDPTKVRDNLAEKIRKKVELVSPQPKKEKENEKDPKPNNKSENKTQDKKTKDKEVVTTAVLKVALHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRKVEVVPPQKDKEGDNKEGGGGEKGSGKKKNKGGGGDKNENIEDGIEKIEHNRMEYLAPPAFGFGYGPYGGYGHGHGHGNIGGYSCVPVYPEQMHFHLHAPAPQMFSDENPNACSVM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0648 296 MobiDBLite consensus disorder prediction 71 116 - -
Gso12g0648 296 SUPERFAMILY HMA, heavy metal-associated domain 17 80 IPR036163 GO:0046872
Gso12g0648 296 CDD HMA 123 183 IPR006121 GO:0046872
Gso12g0648 296 Gene3D - 16 92 - -
Gso12g0648 296 Gene3D - 116 192 - -
Gso12g0648 296 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 296 IPR044594 GO:0046872
Gso12g0648 296 SUPERFAMILY HMA, heavy metal-associated domain 119 183 IPR036163 GO:0046872
Gso12g0648 296 CDD HMA 22 82 IPR006121 GO:0046872
Gso12g0648 296 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 4 296 - -
Gso12g0648 296 Pfam Heavy-metal-associated domain 23 80 IPR006121 GO:0046872
Gso12g0648 296 Pfam Heavy-metal-associated domain 124 183 IPR006121 GO:0046872
Gso12g0648 296 MobiDBLite consensus disorder prediction 181 221 - -
Gso12g0648 296 ProSiteProfiles Heavy-metal-associated domain profile. 27 75 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0648 Gso-Chr12 6224213 6226199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0648 - - gmx:100797817 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0648 12 6224213 6226199 Gso11g1472 11 17095847 17097817 GST